CAZyme Information

Basic Information
SpeciesBrassica rapa
Cazyme IDBra020331
FamilyGT4
Protein PropertiesLength: 505 Molecular Weight: 56235.2 Isoelectric Point: 8.6684
ChromosomeChromosome/Scaffold: 02 Start: 6252053 End: 6254229
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43164638e-23
  PLVLGIAGRLVKDKGHPLMFSALKRVFEENKKARENVVVLVAGDGPWGNRYKELGSSNVIVLGPLDQEKLAEFYNAIDVFVNPTLRAQGLDHTLLEAMVS
  GKPVLATRLASITGSVVVGPHLGYTFSPNVESLAEAISRVVSDGREEL
Full Sequence
Protein Sequence     Length: 505     Download
MARENPLMSF SFSLRYLCHF TLLISVLSFV SFLFRHNTTL CSFPYDHNPN ADHTFDHTHD    60
NETIDLLTFS SAWNHLTFSP SKPNKILKIA VVVKKWPQKS QAGGLERHAL TLHLALANRG    120
HEVHVFTAAS PSFPEYGLKN LRFHLSQPTS GGYLDQASLS QELQTQNASG RPFDVVHTES    180
VGLLHTRAKN LQNVVASWHG IAYETLHSDI IQELLRQADV AAGAEAEQPP PSAPALTERA    240
KRVVEEVKFF QRYAHHVATS DHCGDVLKRI YMIPEERVHI VLNGVDESVF KPDVSKRESF    300
RERFGVRSVA KNREPPLVLG IAGRLVKDKG HPLMFSALKR VFEENKKARE NVVVLVAGDG    360
PWGNRYKELG SSNVIVLGPL DQEKLAEFYN AIDVFVNPTL RAQGLDHTLL EAMVSGKPVL    420
ATRLASITGS VVVGPHLGYT FSPNVESLAE AISRVVSDGR EELEKKGKEA RKRSLRLFTA    480
SKMADAYERL FLCISDKSYC TIQA* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03808GT1_cap1E_like8.0e-3388489421+
cd03807GT1_WbnK_like6.0e-33248491251+
TIGR00032argG1.0e-33111490405+
cd03798GT1_wlbH_like5.0e-40103491415+
cd03801GT1_YqgM_like5.0e-6088491417+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAB10782.1015041521glycosyl transferase-like [Arabidopsis thaliana]
EMBLCBI16041.1012503131606unnamed protein product [Vitis vinifera]
RefSeqNP_200715.2015041505glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqXP_002280256.1015031484PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002313414.10724961411predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3c48_B0.000069749136422A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c48_A0.000069749136422A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB2jjm_L0.000068749114382A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_K0.000068749114382A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_J0.000068749114382A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
Transmembrane Domains
StartEnd
1234
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EG4183902811093850
DK50114619711970
DK5607122003065050
ES94527416411640
DK501146221992200.025
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149492915
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra013399
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126mCiclev10003490m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10033297Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr5g026360.1Medtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2Pp1s231_59V6.1
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.003G105500.1Potri.001G128300.1
Prunus persicappa004871mppa024212m
Ricinus communis30150.m00047029827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Sorghum bicolorSb03g029770.1
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny