| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra020468 |
| Family | GT1 |
| Protein Properties | Length: 399 Molecular Weight: 44550.9 Isoelectric Point: 4.7755 |
| Chromosome | Chromosome/Scaffold: 02 Start: 25198793 End: 25201527 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT1 | 72 | 387 | 1.9e-34 |
| HWMWPLFTEEWGSWRSEELNLSCYPFADPVTDLPIWHIRPPSPLVLYGFSKEIVECPDYWPLSVRVCGFWFIPNEWQFSCNKCGDNPSAGPLGTDDSHTT CSNHTELYSFVSSLEPALPIFVGLSSIGSMGFMKNPLAFFRILESVTQITGYRFILLTAGYEPLEAAIHTIANKPASKRSLQEGVSIFNGKLFCFSGQVP YNWLFRRCAAAIHHGGSGSTAAALHAGIPQIICPFMMDQFYWAEKMTWLGVAPQPLKRNHLLPEESNDESTMEAAQVVAKAVYDALSAETRASAMEIAEL LSREDGVSEAVRVLRE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 399 Download |
| MDGDLVVINF FALEGWSLAE LYQIRCVVAA PYVVPYSPPS GFERQFRKEL PELYKYLKEA 60 PIGKVSWSDV THWMWPLFTE EWGSWRSEEL NLSCYPFADP VTDLPIWHIR PPSPLVLYGF 120 SKEIVECPDY WPLSVRVCGF WFIPNEWQFS CNKCGDNPSA GPLGTDDSHT TCSNHTELYS 180 FVSSLEPALP IFVGLSSIGS MGFMKNPLAF FRILESVTQI TGYRFILLTA GYEPLEAAIH 240 TIANKPASKR SLQEGVSIFN GKLFCFSGQV PYNWLFRRCA AAIHHGGSGS TAAALHAGIP 300 QIICPFMMDQ FYWAEKMTWL GVAPQPLKRN HLLPEESNDE STMEAAQVVA KAVYDALSAE 360 TRASAMEIAE LLSREDGVSE AVRVLREEVC EVSGSNQT* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PHA03392 | egt | 0.0002 | 281 | 323 | 43 | + ecdysteroid UDP-glucosyltransferase; Provisional | ||
| TIGR01426 | MGT | 4.0e-8 | 268 | 350 | 93 | + glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. | ||
| COG1819 | COG1819 | 3.0e-20 | 190 | 388 | 200 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 2.0e-39 | 4 | 385 | 384 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC08249.1 | 0 | 13 | 375 | 106 | 470 | sterol glucosyltransferase-like protein [Arabidopsis thaliana] |
| EMBL | CBI23867.1 | 0 | 1 | 396 | 103 | 484 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_568452.2 | 0 | 1 | 397 | 120 | 518 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002273501.1 | 0 | 1 | 396 | 385 | 785 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002528612.1 | 0 | 4 | 389 | 121 | 508 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1iir_A | 0.0000000000002 | 177 | 389 | 229 | 398 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 3h4t_A | 0.00000000008 | 258 | 389 | 264 | 381 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 3h4i_A | 0.00000000008 | 258 | 389 | 264 | 381 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 0.00000001 | 265 | 372 | 288 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 0.00000001 | 265 | 372 | 288 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CX189102 | 183 | 103 | 284 | 0 |
| DT755075 | 276 | 118 | 389 | 0 |
| GT034474 | 293 | 107 | 389 | 0 |
| DK557076 | 171 | 229 | 399 | 0 |
| BQ855978 | 241 | 84 | 319 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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