| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra020700 |
| Family | AA1 |
| Protein Properties | Length: 596 Molecular Weight: 65889.6 Isoelectric Point: 8.165 |
| Chromosome | Chromosome/Scaffold: 02 Start: 23684445 End: 23687258 |
| Description | SKU5 similar 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 21 | 516 | 0 |
| ATVCLAADPYVFFDWTVSYLTASPLGTRQQVIGINGQFPGPILNVTTNWNVVVNVKNNLDEPLLLTWNGIQHRKNSWQDGVLGTNCPIPSGWNWTYEFQV KDQIGSFFYFPSTNFQRAAGGYGGIIINNRDIIPVPFLLPDGDVTLFISDWFTKSHKKLRKDVESKIDFGAPDGILMNGFGPFPYSSELASGGFPYGTIN VEPGRTYRFRVHNSGIATTLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTMDQSGSNDYYIVASTRFTKSSSSPKATGVAILHYSSSQGP ASGPLPDPPIESDTSFSMNQARSIRLNVSAGAARPNPQGSFKYGQITVTDVYVIVNSPPEKIDGRLRATLNGISYLPPSTPLKLAQQYNISGVYKLDFPK RPMNRHPKVDTSVMNGTYKGFMEIIFQNSDTTVKSYHLDGYAFFVVGMDFGLWTENSRSLYNKGDGVARSTTQVFPGAWTAILVYLDNAGMWNLRI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 596 Download |
| MRCSPPHLPC TSLVVLFLSV ATVCLAADPY VFFDWTVSYL TASPLGTRQQ VIGINGQFPG 60 PILNVTTNWN VVVNVKNNLD EPLLLTWNGI QHRKNSWQDG VLGTNCPIPS GWNWTYEFQV 120 KDQIGSFFYF PSTNFQRAAG GYGGIIINNR DIIPVPFLLP DGDVTLFISD WFTKSHKKLR 180 KDVESKIDFG APDGILMNGF GPFPYSSELA SGGFPYGTIN VEPGRTYRFR VHNSGIATTL 240 NFRIQNHNLL LVETEGSYTV QQNYTNMDIH VGQSFSFLVT MDQSGSNDYY IVASTRFTKS 300 SSSPKATGVA ILHYSSSQGP ASGPLPDPPI ESDTSFSMNQ ARSIRLNVSA GAARPNPQGS 360 FKYGQITVTD VYVIVNSPPE KIDGRLRATL NGISYLPPST PLKLAQQYNI SGVYKLDFPK 420 RPMNRHPKVD TSVMNGTYKG FMEIIFQNSD TTVKSYHLDG YAFFVVGMDF GLWTENSRSL 480 YNKGDGVARS TTQVFPGAWT AILVYLDNAG MWNLRIDNLA SWYLGQEVYL NVVNPEIDTS 540 ENSIPENTIY CGRLSPLQRD QSQRVNFSGS ARSILATSRG ILLALFAILI SSLAR* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 4.0e-166 | 11 | 555 | 547 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 6.0e-174 | 11 | 555 | 556 | + copper ion binding / pectinesterase | ||
| PLN02835 | PLN02835 | 3.0e-180 | 7 | 553 | 549 | + oxidoreductase | ||
| PLN00044 | PLN00044 | 0 | 26 | 568 | 549 | + multi-copper oxidase-related protein; Provisional | ||
| PLN02354 | PLN02354 | 0 | 11 | 557 | 552 | + copper ion binding / oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA96965.1 | 0 | 1 | 559 | 1 | 544 | pectinesterase-like protein [Arabidopsis thaliana] |
| EMBL | CBI35585.1 | 0 | 24 | 593 | 23 | 592 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199656.1 | 0 | 1 | 559 | 1 | 550 | sks3 (SKU5 Similar 3); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002321241.1 | 0 | 5 | 559 | 2 | 554 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527262.1 | 0 | 10 | 581 | 6 | 582 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 33 | 552 | 6 | 539 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1asq_A | 0 | 33 | 552 | 6 | 539 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1asp_B | 0 | 33 | 552 | 6 | 539 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1asp_A | 0 | 33 | 552 | 6 | 539 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1aso_B | 0 | 33 | 552 | 6 | 539 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
