| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra020720 |
| Family | AA1 |
| Protein Properties | Length: 560 Molecular Weight: 63489.7 Isoelectric Point: 9.272 |
| Chromosome | Chromosome/Scaffold: 02 Start: 23516002 End: 23519492 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 19 | 545 | 0 |
| CTAHRHTFTVKEVPYKKLCSTKKILTVNGRFPGQTLKVYKGDTIYVNVRNRASENITMHWHGVEQPRNPWSDGPEYITQCPIRPGSDFIYEVIFSTEETT VWWHAHSSWTRATVHGLIFVYPRPPKSLPFPKSDHEVPLIFGEWWKKDVREVVELFMRTGGDPNVSDALTINGHPGFLYPCSKSDTFKLMVEKSKTYRIR MVNAALNLILFFAIAKHNLTVVSADGHYTKPINATYITISPGQTLDLLLHADQNPKSTYYMAARAYHSNPNINFNNSTTIGILRYTSSTSSSSKHYPNLP YYNDTSAAFRFFTSIKCLYSGQVPVKISRRIISTVSINNLMCPNNLCEGPNGSRLAASMNNISFVTPSHVDILKAYYYHIRGVYGTRFPEFPPLVFNFTA DDQPLFLQTPRFATEVKILKFGESVEIVLQGTSLVGGGIDHPMHLHGFSFYEVGVGFGNYNVTEDPSNYNLKDPPYINTATVPRNGWVAIRFIADNPGVW FMHCHFDRHLTWGMKVVFIVMNGRGLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 560 Download |
| MSHPLFIYFL ISLSLYRSCT AHRHTFTVKE VPYKKLCSTK KILTVNGRFP GQTLKVYKGD 60 TIYVNVRNRA SENITMHWHG VEQPRNPWSD GPEYITQCPI RPGSDFIYEV IFSTEETTVW 120 WHAHSSWTRA TVHGLIFVYP RPPKSLPFPK SDHEVPLIFG EWWKKDVREV VELFMRTGGD 180 PNVSDALTIN GHPGFLYPCS KSDTFKLMVE KSKTYRIRMV NAALNLILFF AIAKHNLTVV 240 SADGHYTKPI NATYITISPG QTLDLLLHAD QNPKSTYYMA ARAYHSNPNI NFNNSTTIGI 300 LRYTSSTSSS SKHYPNLPYY NDTSAAFRFF TSIKCLYSGQ VPVKISRRII STVSINNLMC 360 PNNLCEGPNG SRLAASMNNI SFVTPSHVDI LKAYYYHIRG VYGTRFPEFP PLVFNFTADD 420 QPLFLQTPRF ATEVKILKFG ESVEIVLQGT SLVGGGIDHP MHLHGFSFYE VGVGFGNYNV 480 TEDPSNYNLK DPPYINTATV PRNGWVAIRF IADNPGVWFM HCHFDRHLTW GMKVVFIVMN 540 GRGLNQQILP PPPNLPPCY* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 5.0e-50 | 24 | 540 | 568 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02191 | PLN02191 | 8.0e-70 | 30 | 537 | 542 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 4.0e-71 | 5 | 536 | 567 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-87 | 23 | 536 | 545 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 19 | 543 | 529 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC78283.1 | 0 | 23 | 549 | 30 | 564 | putative laccase [Rosa hybrid cultivar] |
| GenBank | ACU17753.1 | 0 | 5 | 558 | 10 | 566 | unknown [Glycine max] |
| DDBJ | BAB11074.1 | 0 | 76 | 559 | 1 | 489 | laccase (diphenol oxidase) [Arabidopsis thaliana] |
| RefSeq | NP_199621.2 | 0 | 1 | 559 | 1 | 564 | TT10 (TRANSPARENT TESTA 10); copper ion binding / laccase [Arabidopsis thaliana] |
| RefSeq | XP_002264394.1 | 0 | 5 | 558 | 12 | 567 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 37 | 536 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1asq_A | 0 | 37 | 536 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1asp_B | 0 | 37 | 536 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1asp_A | 0 | 37 | 536 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1aso_B | 0 | 37 | 536 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
