| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra021099 |
| Family | GT14 |
| Protein Properties | Length: 430 Molecular Weight: 49139.5 Isoelectric Point: 9.7052 |
| Chromosome | Chromosome/Scaffold: 01 Start: 23974825 End: 23976929 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 86 | 341 | 0 |
| FAYLVSGSKGDVEKLWRTLRAVYHPRNHYVVHLDLESPVDERLELASRINKDPMYSKTGNVYMITKANLVTYRGPTMVANTLHACAVLLKRSANWDWFIN LSASDYPLVTQDDLLHTFSSLDRNLNFIEHTSELGWKEEKRAMPVMIDPGLYLLNKSDIYWVTPRRSLPTAFKLFTGSAWMALSRPFVEYCIWGWDNLPR TLLMYYTNFVSSPESYFHTVICNVPEFSKTAVNHDLHYISWDTPPQQHPHVLTLND | |||
| Full Sequence |
|---|
| Protein Sequence Length: 430 Download |
| MGYVNMEKRW VLFPLVITSL AFVFLLATSF NMGLISSLRK FNNIFSIIPS RHSHAKNQTK 60 LDFAESKLAR QRQTRPHEED NNLPRFAYLV SGSKGDVEKL WRTLRAVYHP RNHYVVHLDL 120 ESPVDERLEL ASRINKDPMY SKTGNVYMIT KANLVTYRGP TMVANTLHAC AVLLKRSANW 180 DWFINLSASD YPLVTQDDLL HTFSSLDRNL NFIEHTSELG WKEEKRAMPV MIDPGLYLLN 240 KSDIYWVTPR RSLPTAFKLF TGSAWMALSR PFVEYCIWGW DNLPRTLLMY YTNFVSSPES 300 YFHTVICNVP EFSKTAVNHD LHYISWDTPP QQHPHVLTLN DTVQMISSGA AFARKFKRDD 360 KVLDVIDKAF LRRRNDKDGF TPGGWCSGKP KCSQVGDVAN VKPGLGAKRL QGLVEKLVSE 420 AKTGVNQCK* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 5.0e-88 | 86 | 341 | 260 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 1 | 429 | 429 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK83637.1 | 0 | 1 | 429 | 1 | 424 | AT3g15350/K7L4_15 [Arabidopsis thaliana] |
| RefSeq | NP_566506.1 | 0 | 1 | 429 | 1 | 424 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002317501.1 | 0 | 1 | 429 | 1 | 419 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329084.1 | 0 | 1 | 429 | 1 | 419 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533550.1 | 0 | 1 | 429 | 1 | 417 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.00000000001 | 97 | 359 | 96 | 368 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.00000000001 | 97 | 359 | 96 | 368 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.00000000001 | 97 | 359 | 96 | 368 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.00000000001 | 97 | 359 | 96 | 368 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00000000004 | 97 | 359 | 96 | 368 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
