y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra021137 |
Family | GH17 |
Protein Properties | Length: 387 Molecular Weight: 42965.5 Isoelectric Point: 9.4614 |
Chromosome | Chromosome/Scaffold: 01 Start: 23781238 End: 23783351 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 351 | 0 |
GVNYGRIADNLPSPEAVATLLKSAKIRNIRIYDADHSVLTAFRNTGIEIIVGLGNEFLKDISVAEDRAMTWVKENVEPFIRGGTRISGIAVGNEILGGTT IELWEVLLPAAKNVYYALRRLGLHNMVEVSSPHSEAVFQNSYPPSSCTFRDDVAPFMKPLLTFFWQIGSPFYINAYPFLAYKSDSKEIDLNYAIFEHTKG IYDPKTKLHYDNMFDAMVDASYAALEKAGFPKVQVIVSETGWASKGDPDEAGASVKNARTYNRNLKKRLKKRKGTPYRPNMAVKAYVFALFNENLKPGPT SERNFGLFKPDGSIAYDIGF |
Full Sequence |
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Protein Sequence Length: 387 Download |
MKYSCMVRST FFLSLLFLFA SQTAVAFIGT YGVNYGRIAD NLPSPEAVAT LLKSAKIRNI 60 RIYDADHSVL TAFRNTGIEI IVGLGNEFLK DISVAEDRAM TWVKENVEPF IRGGTRISGI 120 AVGNEILGGT TIELWEVLLP AAKNVYYALR RLGLHNMVEV SSPHSEAVFQ NSYPPSSCTF 180 RDDVAPFMKP LLTFFWQIGS PFYINAYPFL AYKSDSKEID LNYAIFEHTK GIYDPKTKLH 240 YDNMFDAMVD ASYAALEKAG FPKVQVIVSE TGWASKGDPD EAGASVKNAR TYNRNLKKRL 300 KKRKGTPYRP NMAVKAYVFA LFNENLKPGP TSERNFGLFK PDGSIAYDIG FKGLKDSSAT 360 RCGFGTSLNA LVSACVVMFL LLHRFV* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 6.0e-97 | 32 | 351 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02311.1 | 0 | 18 | 368 | 22 | 372 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
EMBL | CBI36326.1 | 0 | 26 | 360 | 35 | 368 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_188201.1 | 0 | 18 | 368 | 30 | 380 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002299750.1 | 0 | 18 | 360 | 4 | 345 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 26 | 360 | 3 | 336 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 32 | 351 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 32 | 351 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 32 | 351 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 32 | 351 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_B | 0 | 32 | 351 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |