| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra021239 |
| Family | AA1 |
| Protein Properties | Length: 585 Molecular Weight: 66509.9 Isoelectric Point: 8.8189 |
| Chromosome | Chromosome/Scaffold: 01 Start: 23142545 End: 23145920 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 34 | 563 | 0 |
| KIRRFKWEVKYELKSPDCFEKLVITINGQLPGPTIKAQQGDTIIVELKNSFMTENVAVHWHGIRQVGTPWFDGVEGVTQCPILPGEIFTYQFVVDRPGTY MYHSHYGMQRESGLIGMIRVSPPSTEPEPFTYDYDRSLLLTDWYHKGMSEKATGLASIPFKWVGEPQSLMIQGRGRFNCTNNMMTPQRSEAEVCNASHAD CSRFVLMVIPGKTYRLRIGSLTSLSALSFQIEGHNLTVVEADGHYVEPFTVRNLFIYSGETYSVLLKADQNPSRNYWITTSIVSRPEKTPPATAVLNYHP HHPRKHPPTPASSNFRPEWNDTRHRLAQSVAIKARKGFAHAPPENSDKVIVLLNTQNKVNGYMRWSVNNVSYQHPTTPYLIALKHNLTNAFDWRFTPPER YDSKSYDIFAVPSNANATMSDGIYRLKFNSTVDVVLQNANTMSVNNSETHPWHLHGHDFWVLGYGEGKFNEMEDPKRYNLVDPIMKNTVAVQPYGWTALR FRADNPGVWAFHCHIESHFFMGMRIVFASG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 585 Download |
| MMRSCRFSDT SHVFTLMFIC FITLFSSSVL VQGKIRRFKW EVKYELKSPD CFEKLVITIN 60 GQLPGPTIKA QQGDTIIVEL KNSFMTENVA VHWHGIRQVG TPWFDGVEGV TQCPILPGEI 120 FTYQFVVDRP GTYMYHSHYG MQRESGLIGM IRVSPPSTEP EPFTYDYDRS LLLTDWYHKG 180 MSEKATGLAS IPFKWVGEPQ SLMIQGRGRF NCTNNMMTPQ RSEAEVCNAS HADCSRFVLM 240 VIPGKTYRLR IGSLTSLSAL SFQIEGHNLT VVEADGHYVE PFTVRNLFIY SGETYSVLLK 300 ADQNPSRNYW ITTSIVSRPE KTPPATAVLN YHPHHPRKHP PTPASSNFRP EWNDTRHRLA 360 QSVAIKARKG FAHAPPENSD KVIVLLNTQN KVNGYMRWSV NNVSYQHPTT PYLIALKHNL 420 TNAFDWRFTP PERYDSKSYD IFAVPSNANA TMSDGIYRLK FNSTVDVVLQ NANTMSVNNS 480 ETHPWHLHGH DFWVLGYGEG KFNEMEDPKR YNLVDPIMKN TVAVQPYGWT ALRFRADNPG 540 VWAFHCHIES HFFMGMRIVF ASGIDRVANL PSSIMGCGQT KRLV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 2.0e-83 | 51 | 563 | 543 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| TIGR03389 | laccase | 1.0e-104 | 33 | 560 | 558 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| PLN02604 | PLN02604 | 0 | 10 | 582 | 573 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 0 | 35 | 580 | 547 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02191 | PLN02191 | 0 | 35 | 584 | 551 | + L-ascorbate oxidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY47050.1 | 0 | 26 | 583 | 26 | 575 | ascorbate oxidase [Solanum lycopersicum] |
| DDBJ | BAB86897.1 | 0 | 31 | 581 | 21 | 562 | syringolide-induced protein B13-1-1 [Glycine max] |
| RefSeq | NP_195693.1 | 0 | 1 | 582 | 1 | 582 | L-ascorbate oxidase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002306323.1 | 0 | 16 | 583 | 4 | 567 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528975.1 | 0 | 17 | 581 | 16 | 571 | l-ascorbate oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 34 | 582 | 2 | 543 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
| PDB | 1asq_A | 0 | 34 | 582 | 2 | 543 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
| PDB | 1asp_B | 0 | 34 | 582 | 2 | 543 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
| PDB | 1asp_A | 0 | 34 | 582 | 2 | 543 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
| PDB | 1aso_B | 0 | 34 | 582 | 2 | 543 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
