| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra021506 |
| Family | GH35 |
| Protein Properties | Length: 862 Molecular Weight: 95474.2 Isoelectric Point: 9.2332 |
| Chromosome | Chromosome/Scaffold: 01 Start: 24896263 End: 24900563 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 34 | 358 | 0 |
| TINGKRRILISGSIHYPRSTPEMWPDLIRKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVKQSGLYLHLRIGPYVCAEWNFGGFPVWLKY VPGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPIILSQIENEYGPMEYELGAPGRSYTNWAAKMAVGLGTGVPWVMCKQDDAPDPIINACNGF YCDYFSPNKAYKPKMWTEAWTGWFTKFGGPVPYRPAEDMAFSVARFIQKGGSFINYYMVKLKLLSSVLAIQVLIHLFIAQFHGGTNFGRTAGGPFIATSY DYDAPLDEYGLERQPKWGHLKDLHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 862 Download |
| MKNVAMAAAS ALFLLGFLVS LVSASVSYDS RAITINGKRR ILISGSIHYP RSTPEMWPDL 60 IRKAKEGGLD VIQTYVFWNG HEPSPGKYYF EGNYDLVKFV KLVKQSGLYL HLRIGPYVCA 120 EWNFGGFPVW LKYVPGISFR TDNGPFKAQM QRFTTKIVNM MKAERLFESQ GGPIILSQIE 180 NEYGPMEYEL GAPGRSYTNW AAKMAVGLGT GVPWVMCKQD DAPDPIINAC NGFYCDYFSP 240 NKAYKPKMWT EAWTGWFTKF GGPVPYRPAE DMAFSVARFI QKGGSFINYY MVKLKLLSSV 300 LAIQVLIHLF IAQFHGGTNF GRTAGGPFIA TSYDYDAPLD EYGLERQPKW GHLKDLHRAI 360 KLCEPALVSG QLTRIPLGNY QEAHQYKSKS GACSAFLANY NQRSYAKVTF GKNHYNLPPW 420 SISILPDCKN TVYNTARVGA QTSRMKMVRV PVHGGLSWQA YNEDPSSYVD ESFTMVGLVE 480 QINTTRDTSD YLWYMTDVKI NSNEGFLRGG NLPTLTILSA GHAMHVFING QLTGSAYGSL 540 DSPKLTFRRG VNLRAGFNKI AILSIAVGLP NVGPHFETWN AGVLGPVSLN GLNGGRRDLS 600 WQKWTYKVGL RGESLSLHSL SGSSSVEWAE GAFVAQKQPL TWYKTTFSAP AGDSPLAVDM 660 GSMGKGQIWI NGQSVGRHWP AYKAVGTCRE CSYIGTFNEN KCLRNCGEAS QRWYHVPRSW 720 LKPTGNLLVV FEEWGGDPNG ISLVRREVDT VCADIYEWQS TLVNYQLHAS GKVNKPLHPK 780 VHLQCGPGQK ITTVKFASFG TPQGTCGSYR QGSCHAHHSY DAFNRLCVGQ NWCSVTVAPA 840 MFGGDPCPNV MKKLSVEAVC A* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 5.0e-6 | 48 | 184 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 1.0e-19 | 28 | 350 | 392 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 2.0e-21 | 783 | 860 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-159 | 32 | 360 | 345 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 28 | 861 | 835 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM13196.1 | 0 | 23 | 861 | 31 | 847 | galactosidase, putative [Arabidopsis thaliana] |
| GenBank | ABK96254.1 | 0 | 22 | 861 | 29 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
| RefSeq | NP_187988.1 | 0 | 23 | 861 | 31 | 847 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding [Arabidopsis thaliana] |
| RefSeq | XP_002327432.1 | 0 | 22 | 861 | 22 | 839 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527409.1 | 0 | 1 | 861 | 6 | 845 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 9.99967e-42 | 19 | 356 | 1 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.002 | 514 | 679 | 399 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1e-37 | 25 | 430 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 1e-37 | 25 | 430 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
