| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra021650 |
| Family | GT8 |
| Protein Properties | Length: 675 Molecular Weight: 76822 Isoelectric Point: 9.7138 |
| Chromosome | Chromosome/Scaffold: 04 Start: 13649292 End: 13653022 |
| Description | los glycosyltransferase 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 355 | 647 | 0 |
| CLSMRLTTEYFTLDHERAKPFQQSYINPDLYHYVVFSDNVLACAVVVNSTISSSKDPGKIVFHVVTDSLNYPSISMWFILNPVSRATIQILNIDDMNVLP LDHAQLLMKQNSSDPRVISALNHARFYLPDIFPGLNKIILFDHDVAVQRDLSSLWSLKMNGKVIGAVETCHEGEPSYIAMDTLINFSDAWVAEKFDSKAC TWAFGMNLFDLKEWRRQNLTSVYLNYFNQGVKRHLWKAGSLPLGWLTFFGQAIPLEKRWNVVGLGHESGVKAGDIEEAAVIHYDGIMKPWLDI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 675 Download |
| MLWAIDSVNV STHKWLLGRT SRRTNQKKDD RSKFAPPSTI CVGCAVLRLS GNEEIIYEEK 60 FRTLMNQIRR WRRILILSLL LLSVVTPIVF LSNRIKSITS VDRGEFIEEV SDIRYKTNDD 120 LRLTAFEQDG EGFKEPKRIL KDDELNPVVR SSVSNKSHDG SQSSERDKTL GLSEISGGNS 180 NKTKEEQSLV SQQTNSSDTA EKISAKDIQA SPKTKFQRPL AKSEKNSRAQ LGRATDDRIK 240 EIRDKIIQAK AYLNLALPGN NSQIVKELRV RTKELERAVG DATKDKHLSK SSPQRLKAME 300 LALYKVSRVF HNCPAIATKL HAMTYKSEEQ ARAQKKQAAH LMHLAARTTP KGLHCLSMRL 360 TTEYFTLDHE RAKPFQQSYI NPDLYHYVVF SDNVLACAVV VNSTISSSKD PGKIVFHVVT 420 DSLNYPSISM WFILNPVSRA TIQILNIDDM NVLPLDHAQL LMKQNSSDPR VISALNHARF 480 YLPDIFPGLN KIILFDHDVA VQRDLSSLWS LKMNGKVIGA VETCHEGEPS YIAMDTLINF 540 SDAWVAEKFD SKACTWAFGM NLFDLKEWRR QNLTSVYLNY FNQGVKRHLW KAGSLPLGWL 600 TFFGQAIPLE KRWNVVGLGH ESGVKAGDIE EAAVIHYDGI MKPWLDIRID KYKRYWNIHV 660 AYHHPYLQRC NIHD* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02769 | PLN02769 | 2.0e-108 | 257 | 673 | 438 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 5.0e-121 | 249 | 673 | 457 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 1.0e-133 | 249 | 672 | 450 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 1.0e-164 | 84 | 672 | 641 | + Probable galacturonosyltransferase | ||
| PLN02718 | PLN02718 | 0 | 65 | 674 | 614 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_563771.1 | 0 | 65 | 673 | 1 | 588 | GAUT6 (Galacturonosyltransferase 6); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_850150.1 | 0 | 65 | 674 | 1 | 610 | LGT5 (LOS GLYCOSYLTRANSFERASE 5); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002282102.1 | 0 | 65 | 674 | 1 | 588 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307628.1 | 0 | 103 | 674 | 31 | 605 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
| RefSeq | XP_002520989.1 | 0 | 68 | 673 | 9 | 632 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
