| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra021821 |
| Family | GH9 |
| Protein Properties | Length: 510 Molecular Weight: 57596.8 Isoelectric Point: 6.0779 |
| Chromosome | Chromosome/Scaffold: 04 Start: 14710575 End: 14713516 |
| Description | glycosyl hydrolase 9B8 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 41 | 486 | 0 |
| DYGEALSKSLLYFEAQRSGRLPYNVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLASTGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGD TDHYCWQRPEDMTTSRRAFKIDENNPGSDLAGETAAAMAAASIVFRTTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLRVVKSYYASVSGYMDELLWGAT WLYRATDNDHYMSYVVDMAHQLGGLSWAMSEFSWDVKFAGVQLLASMLIKEEQHKQHSKIIQQYKSKADHYLCSILNKNINGTNVQRTPAGLLYVRQWNN MQYVSTASFLLTVYSDYLRKSNSDLQCHEGTVTPDEMIVFAKSQIDYILGSNPMKTSYLVGYGPKYPTRVHHRGASIASYKDYKGFIGCTQGYDYWYGRP EPNPSVLVGALVGGPDHRDEFVDRRDNYVQTEACTYNTAPLVGVFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 510 Download |
| MTVKEIHRNK RWHFLLLILI TMSPAESLIG VSPETDVGGF DYGEALSKSL LYFEAQRSGR 60 LPYNVDLVGG YHDAGDHVKF GLPMAFTVTM LSWSVIEYGD SLASTGELSH ALEAIKWGTD 120 YFIKAHTSPN VLWAEVGDGD TDHYCWQRPE DMTTSRRAFK IDENNPGSDL AGETAAAMAA 180 ASIVFRTTNP HYSHLLLHHA QQLFEFGDKY RGKYDESLRV VKSYYASVSG YMDELLWGAT 240 WLYRATDNDH YMSYVVDMAH QLGGLSWAMS EFSWDVKFAG VQLLASMLIK EEQHKQHSKI 300 IQQYKSKADH YLCSILNKNI NGTNVQRTPA GLLYVRQWNN MQYVSTASFL LTVYSDYLRK 360 SNSDLQCHEG TVTPDEMIVF AKSQIDYILG SNPMKTSYLV GYGPKYPTRV HHRGASIASY 420 KDYKGFIGCT QGYDYWYGRP EPNPSVLVGA LVGGPDHRDE FVDRRDNYVQ TEACTYNTAP 480 LVGVFARLIE LEEQTLEEED VSLVATYKK* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02420 | PLN02420 | 0 | 1 | 507 | 527 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 38 | 487 | 468 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 14 | 487 | 492 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 41 | 486 | 466 | + Glycosyl hydrolase family 9. | ||
| PLN00119 | PLN00119 | 0 | 41 | 487 | 465 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN81074.1 | 0 | 40 | 507 | 27 | 547 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_180858.1 | 0 | 1 | 509 | 1 | 525 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002321149.1 | 0 | 28 | 507 | 28 | 526 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002525326.1 | 0 | 40 | 507 | 44 | 527 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| RefSeq | XP_002529469.1 | 0 | 40 | 502 | 27 | 501 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 40 | 491 | 3 | 431 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1ksc_A | 0 | 40 | 491 | 3 | 431 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1ks8_A | 0 | 40 | 491 | 3 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 24 | 491 | 10 | 462 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 40 | 490 | 4 | 442 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
