y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra022470 |
Family | GH9 |
Protein Properties | Length: 631 Molecular Weight: 70854.8 Isoelectric Point: 9.8463 |
Chromosome | Chromosome/Scaffold: 02 Start: 9603712 End: 9607608 |
Description | Six-hairpin glycosidases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 123 | 594 | 0 |
NYTLAIHKAIQFFDAQKSGKLPKNNRVSWRGNSGLKDGLPDVVGGLVGGYYDGGSNTKFHFPMAFSMTMLSWSLIEYSQKFKAINEYDHMRDVLKWGTDY LLLTFNNSATRLDHIYAQVGGGLRDSESPDDIYCWQRPEDMSYDRPVISLTTATDLGAEVASALAAASIVFNDKPTYAKKLKKGAETLWPFFRNKNRRKR YSDGQPMIQAFYNSTSMFDELMWAGAWLYYATGNQTYIQFATNPSVPKTAKAFANQPELMVPSWNNKLPGAMLLMTRYRLFLNPGFPYENMLSRYHNATG VTMCAYLKQYNVFNRTSGGLIQLNMGKPRPLEYVAHASFLASLFADYLNSTGVPGWYCGPTLVSTQVLKDFAKSQIDYILGDNPLKMSYIVGFGKKFPRH VYHRGATIPNDKKRRSCREGLKYRDTKNPNPNNITGAMVGGPNKSDQFHDIRSNYNASEPTMSGNAGIVAAL |
Full Sequence |
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Protein Sequence Length: 631 Download |
MHPGNLWGGR LDAIDSDRAE AEEEERRRNM TEWDRGALHS QQLSAEHQRN QLDETQQGWL 60 LAPQDSWKKK RKKYVNLGCI SVSRTVFTWT VGSIVVLFLV VALPIIIVKS LPRHKSTPPP 120 PDNYTLAIHK AIQFFDAQKS GKLPKNNRVS WRGNSGLKDG LPDVVGGLVG GYYDGGSNTK 180 FHFPMAFSMT MLSWSLIEYS QKFKAINEYD HMRDVLKWGT DYLLLTFNNS ATRLDHIYAQ 240 VGGGLRDSES PDDIYCWQRP EDMSYDRPVI SLTTATDLGA EVASALAAAS IVFNDKPTYA 300 KKLKKGAETL WPFFRNKNRR KRYSDGQPMI QAFYNSTSMF DELMWAGAWL YYATGNQTYI 360 QFATNPSVPK TAKAFANQPE LMVPSWNNKL PGAMLLMTRY RLFLNPGFPY ENMLSRYHNA 420 TGVTMCAYLK QYNVFNRTSG GLIQLNMGKP RPLEYVAHAS FLASLFADYL NSTGVPGWYC 480 GPTLVSTQVL KDFAKSQIDY ILGDNPLKMS YIVGFGKKFP RHVYHRGATI PNDKKRRSCR 540 EGLKYRDTKN PNPNNITGAM VGGPNKSDQF HDIRSNYNAS EPTMSGNAGI VAALISLTSS 600 GGYQIDKNTM FNGVPPLYPP APPPPKAWKP * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02266 | PLN02266 | 7.0e-92 | 93 | 602 | 536 | + endoglucanase | ||
PLN02340 | PLN02340 | 3.0e-95 | 98 | 603 | 521 | + endoglucanase | ||
PLN02613 | PLN02613 | 9.0e-99 | 122 | 609 | 503 | + endoglucanase | ||
PLN02345 | PLN02345 | 1.0e-119 | 131 | 601 | 483 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 7.0e-151 | 123 | 594 | 478 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACT54547.1 | 0 | 1 | 614 | 1 | 612 | endo-1,4-beta-glucanase [Dimocarpus longan] |
RefSeq | NP_176738.1 | 0 | 1 | 630 | 1 | 623 | KOR2; catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002266444.1 | 0 | 1 | 614 | 1 | 603 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315101.1 | 0 | 1 | 614 | 1 | 605 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514768.1 | 0 | 1 | 614 | 1 | 608 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 123 | 601 | 4 | 432 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1ksc_A | 0 | 123 | 601 | 4 | 432 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1ks8_A | 0 | 123 | 601 | 4 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 120 | 623 | 2 | 461 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 120 | 623 | 2 | 461 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |