| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra022513 |
| Family | AA1 |
| Protein Properties | Length: 550 Molecular Weight: 62571.2 Isoelectric Point: 9.9135 |
| Chromosome | Chromosome/Scaffold: 02 Start: 9323095 End: 9325745 |
| Description | SKU5 similar 10 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 35 | 502 | 0 |
| TYGNVSVTKYVPPTRVILINGKFPGPELYLVTNDNLIINVHNDLDEPFLLSWNGLHLKRNSYQDGVYGTTCPIPPGKNYTYAFHLEDQIGSFFYFPSLAV QKAAGGFGAIRILSRPGTPVPFPQPAGDFTILIGDWYTGEDHKDLKARLDGGRMIPRPYSVLINGNEDTASTSLTVDKGKTYRFRISNVGLQLSLNFEIL GHMLKLVEVEGTYTIQTKFTSLDIHVGQSYSVLVTMDQPPQNYSIVVGTRFTDSRSTNRIILHYSNSKSSKFVPNRQPDNDIDFSIKQARSIKTNLTASR QRQDAQGSYHYGRIKISRTLILESSAGVVNRKQRYAINGVSFVPADTPLKLADYFKIKGVFKVGSIPDKPGRAGIRLETAVMGVHHKDFLEIVFQNREKY VQTYHLDGYNFWVVGIGNRWSTWSHASRRDYNLRDAISRSTTQVYPKSWTAIYVAFDNVGMWNFRSEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 550 Download |
| MAWWPDGGFL MMMMMTIISF VQAEDSNRFF DLRVTYGNVS VTKYVPPTRV ILINGKFPGP 60 ELYLVTNDNL IINVHNDLDE PFLLSWNGLH LKRNSYQDGV YGTTCPIPPG KNYTYAFHLE 120 DQIGSFFYFP SLAVQKAAGG FGAIRILSRP GTPVPFPQPA GDFTILIGDW YTGEDHKDLK 180 ARLDGGRMIP RPYSVLINGN EDTASTSLTV DKGKTYRFRI SNVGLQLSLN FEILGHMLKL 240 VEVEGTYTIQ TKFTSLDIHV GQSYSVLVTM DQPPQNYSIV VGTRFTDSRS TNRIILHYSN 300 SKSSKFVPNR QPDNDIDFSI KQARSIKTNL TASRQRQDAQ GSYHYGRIKI SRTLILESSA 360 GVVNRKQRYA INGVSFVPAD TPLKLADYFK IKGVFKVGSI PDKPGRAGIR LETAVMGVHH 420 KDFLEIVFQN REKYVQTYHL DGYNFWVVGI GNRWSTWSHA SRRDYNLRDA ISRSTTQVYP 480 KSWTAIYVAF DNVGMWNFRS EFWARQYLGQ QFYFRVHSPA NSTRDEYPLP KNALLCGRAS 540 NRHRRDFIP* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02792 | PLN02792 | 0 | 11 | 543 | 536 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 10 | 544 | 535 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 9 | 543 | 536 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 10 | 537 | 537 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 14 | 540 | 542 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB37498.1 | 0 | 1 | 543 | 1 | 545 | putative pectinesterase [Arabidopsis thaliana] |
| RefSeq | NP_194538.1 | 0 | 1 | 549 | 1 | 547 | sks10 (SKU5 Similar 10); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_195555.2 | 0 | 1 | 543 | 1 | 546 | sks9 (SKU5 Similar 9); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002282214.1 | 0 | 6 | 547 | 4 | 542 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002528421.1 | 0 | 21 | 545 | 23 | 542 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 50 | 537 | 24 | 539 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1asq_A | 0 | 50 | 537 | 24 | 539 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1asp_B | 0 | 50 | 537 | 24 | 539 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1asp_A | 0 | 50 | 537 | 24 | 539 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1aso_B | 0 | 50 | 537 | 24 | 539 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
