CAZyme Information

Basic Information
SpeciesBrassica rapa
Cazyme IDBra022515
FamilyGT68
Protein PropertiesLength: 530 Molecular Weight: 60462 Isoelectric Point: 6.8799
ChromosomeChromosome/Scaffold: 02 Start: 9318242 End: 9320117
DescriptionO-fucosyltransferase family protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT682125050
  DRVLVIPSSKFDYQYDRVIEVERINTCLGRNVVVSFDQFKKSRPPRIDRFICYFSSPQLCYVDDEHIKKLKGLGVSIERKLESPWSEDIKKPSKRNVDEV
  RRSFKSDDDVIAIGDVFYADMEQDWVMQPGGPINHKCKTLIEPNKLILLTAQRFIQTFLGNNFIALHFRRHGFLKFCNAKAPSCFYPIPQAAECIARMVE
  RSNGAVIYLSTDAAESETSLLQSLVVVDGKIVPLVKRPPRNSAEKWDALLYRHGIEDDSQVDAMLDKTICAMSSVFIGASGSTFTEDILRLRKD
Full Sequence
Protein Sequence     Length: 530     Download
MERNSSDDDE EDHQHLIPQN DTRSRHREDP TNGGSSFQIE DIILSRRKIS LNKRYLLAAV    60
SLTILIGLIF LFTDLRQQFS SFKVDPLSSR VKESELRALY LLRQQQLELL SIWNGTTSAN    120
SSVRVAVAKQ ISLNNEIQEE LLSSHKTGNY SGSVVANLYE RCVKVDQKLS DRRTVEWKPR    180
SDKFLFAICL SGQMSNHLIC LEKHMFFAAL LDRVLVIPSS KFDYQYDRVI EVERINTCLG    240
RNVVVSFDQF KKSRPPRIDR FICYFSSPQL CYVDDEHIKK LKGLGVSIER KLESPWSEDI    300
KKPSKRNVDE VRRSFKSDDD VIAIGDVFYA DMEQDWVMQP GGPINHKCKT LIEPNKLILL    360
TAQRFIQTFL GNNFIALHFR RHGFLKFCNA KAPSCFYPIP QAAECIARMV ERSNGAVIYL    420
STDAAESETS LLQSLVVVDG KIVPLVKRPP RNSAEKWDAL LYRHGIEDDS QVDAMLDKTI    480
CAMSSVFIGA SGSTFTEDIL RLRKDWGTSS MCDEYLCRGE EPNFIAEDE* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam10250O-FucT0.0008207496332+
cd11296O-FucT_like0.000618421835+
cd11548NodZ_like2.0e-6309504199+
cd11298O-FucT-24.0e-9310496192+
cd11296O-FucT_like7.0e-18345503169+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAD50008.1015291594AC007651_3 Hypothetical Protein [Arabidopsis thaliana]
GenBankAAM66093.1015291566unknown [Arabidopsis thaliana]
RefSeqNP_173170.2015291564unknown protein [Arabidopsis thaliana]
RefSeqNP_199853.1015291566unknown protein [Arabidopsis thaliana]
RefSeqXP_002264087.1015291559PREDICTED: hypothetical protein [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4ap5_B0.004370496263369A Chain A, Crystal Structure Of Human Pofut2
PDB4ap5_A0.004370496263369A Chain A, Crystal Structure Of Human Pofut2
PDB4ap6_D0.004370496277383A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose
PDB4ap6_C0.004370496277383A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose
PDB4ap6_B0.004370496277383A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose
Transmembrane Domains
StartEnd
5572
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EX1285552941744670
GO8818723531795270
ES8502683611725260
GR4432962421113520
FD5771212521714180
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00900.1Aquca_013_00900.2
Arabidopsis lyrata918074889130474511
Arabidopsis thalianaAT5G50420.1AT1G17270.1AT1G53770.2AT1G53770.1
Brachypodium distachyonBradi1g23980.1
Brassica rapaBra039691Bra016609
Carica papayaevm.model.supercontig_25.202
Capsella rubellaCarubv10008736mCarubv10026161mCarubv10008696m
Citrus clementinaCiclev10025289m
Citrus sinensisorange1.1g008526m
Cucumis sativusCucsa.088930.1Cucsa.149140.2Cucsa.088930.2Cucsa.149140.1
Eucalyptus grandisEucgr.J02587.1Eucgr.I02168.1
Fragaria vescamrna05486.1-v1.0-hybrid
Glycine maxGlyma16g01730.1Glyma07g05200.1
Gossypium raimondiiGorai.010G172800.1Gorai.006G090800.1Gorai.011G054400.1
Linum usitatissimumLus10037461Lus10003929
Malus domesticaMDP0000692823MDP0000881647MDP0000203531
Manihot esculentacassava4.1_004684m
Medicago truncatulaMedtr8g023490.1
Mimulus guttatusmgv1a003863m
Oryza sativaLOC_Os07g38490.1
Panicum virgatumPavirv00005372mPavirv00007596m
Physcomitrella patensPp1s149_19V6.1
Phaseolus vulgarisPhvul.010G122400.1Phvul.009G261000.1
Picea abiesMA_10437033g0010
Populus trichocarpaPotri.003G073500.5Potri.003G073500.1Potri.003G073500.2Potri.003G073500.3Potri.003G073500.4
Potri.003G073500.6
Prunus persicappa004150m
Ricinus communis29884.m000188
Setaria italicaSi029376m
Selaginella moellendorffii146424410382
Sorghum bicolorSb02g037060.1
Thellungiella halophilaThhalv10013133mThhalv10007186mThhalv10011359m
Vitis viniferaGSVIVT01016658001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny