| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra023020 |
| Family | GT2 |
| Protein Properties | Length: 549 Molecular Weight: 63088.2 Isoelectric Point: 8.5551 |
| Chromosome | Chromosome/Scaffold: 03 Start: 8264445 End: 8267349 |
| Description | cellulose synthase like |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT2 | 114 | 290 | 6.8e-34 |
| VQIPMYNEKEVCEQSIAAACKISWPSNRIIIQVLDDSTDPASKELVKKECERWSKEGVNITFEIRDNRKGYKAGALREGMKHSYVKQCDYVAIFDADFQP EPDFLFRTVPFLIHNPKLALVQGRWEFVNAGQCMMTRLQEMSLSYHFMVEQQVGSSTFAFFGFNGTAGVWRISALNE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 549 Download |
| MSPLAFFHRL AHDTLLLSMS QVRSFKASTW EDTITRISLW WEQARAVVVV PVFKFLVALC 60 LIMSVMLFVE MMYMGLVVAY IKLFKRKPEK VYKWVAMEED DVECGGEIFP MVLVQIPMYN 120 EKEVCEQSIA AACKISWPSN RIIIQVLDDS TDPASKELVK KECERWSKEG VNITFEIRDN 180 RKGYKAGALR EGMKHSYVKQ CDYVAIFDAD FQPEPDFLFR TVPFLIHNPK LALVQGRWEF 240 VNAGQCMMTR LQEMSLSYHF MVEQQVGSST FAFFGFNGTA GVWRISALNE SGGWNDQTTV 300 EDMDLAVRAT LRGWKLLYLD DLKVKSELPC SFNALRSQQH RWTCGPANLF RKMAGQIIRS 360 ENVSLWKKLY MLYSFFFMRK LVAHVLSFCF YCVILPATVL FPEVTVPKWA AFYLPSLITL 420 LIALGRLRSI HLLAFWVLFE NAMSLVRTKA LVMGLFETGR VQEWVVTEKL GDGLKTKLIA 480 QAPEEHHVRF RDRVHLMELL VGVYLLFCGC YDIIYGKRTL FLYLLFQSMG FFVVGFGYVG 540 KYVAASSS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13641 | Glyco_tranf_2_3 | 2.0e-28 | 110 | 345 | 237 | + Glycosyltransferase like family 2. Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. | ||
| cd06423 | CESA_like | 6.0e-30 | 114 | 302 | 189 | + CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan. | ||
| COG1215 | COG1215 | 5.0e-36 | 60 | 451 | 396 | + Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | ||
| cd06421 | CESA_CelA_like | 5.0e-41 | 110 | 350 | 244 | + CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end. | ||
| cd06437 | CESA_CaSu_A2 | 5.0e-129 | 110 | 346 | 237 | + Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61171.1 | 0 | 1 | 547 | 1 | 553 | putative glucosyltransferase [Arabidopsis thaliana] |
| EMBL | CAN62185.1 | 0 | 36 | 546 | 20 | 529 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_565813.1 | 0 | 1 | 547 | 1 | 553 | ATCSLA07 (CELLULOSE SYNTHASE LIKE); mannan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002269110.1 | 0 | 49 | 546 | 1 | 497 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315357.1 | 0 | 31 | 546 | 16 | 530 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hg6_A | 1e-21 | 107 | 345 | 137 | 386 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
