y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra023293 |
Family | GH17 |
Protein Properties | Length: 415 Molecular Weight: 44681.3 Isoelectric Point: 7.1605 |
Chromosome | Chromosome/Scaffold: 09 Start: 19849581 End: 19851222 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 348 | 0 |
IGVNYGQIGDNLPSPEEVVPLVKSIGATKVKLYDANPEILKAFSGTGVEFIVGLGNEYLSKMKDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDS SLTDSLLPAMQGVHSALVTAGLSDQIAVTTAHSLAILQTSFPPSAGEFSPSVIDYLKPILEFHRKTDSPFLINAYPFFAYKGSPKEIPLDFVLFQQNQGV VDPTTGFHYDNMLFAQIDAVYSALAAAGYKTLKVQISETGWPSKGDDDEFGATPENAKRYNGNLIKLMKNEKTKTPLRPNNDLIIYVFALFNENMKPGPT SERNYGLFKPDGTQAYSLGF |
Full Sequence |
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Protein Sequence Length: 415 Download |
MELKSFHPSS ALFFLFSVVI LSPTTVTSIG VNYGQIGDNL PSPEEVVPLV KSIGATKVKL 60 YDANPEILKA FSGTGVEFIV GLGNEYLSKM KDPSKALTWI KQNVTPFLPA TNITCITIGN 120 EILALNDSSL TDSLLPAMQG VHSALVTAGL SDQIAVTTAH SLAILQTSFP PSAGEFSPSV 180 IDYLKPILEF HRKTDSPFLI NAYPFFAYKG SPKEIPLDFV LFQQNQGVVD PTTGFHYDNM 240 LFAQIDAVYS ALAAAGYKTL KVQISETGWP SKGDDDEFGA TPENAKRYNG NLIKLMKNEK 300 TKTPLRPNND LIIYVFALFN ENMKPGPTSE RNYGLFKPDG TQAYSLGFTL NDVVKGRNSS 360 SSGGGKTPVL PMTPVAPDSA STGYLAISSA PGKRKGKEAV LSMVVIMLLA RHLL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 5 | 325 | 337 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-100 | 29 | 348 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF31288.1 | 0 | 1 | 406 | 1 | 416 | AC006424_17 CDS [Arabidopsis thaliana] |
RefSeq | NP_174563.2 | 0 | 1 | 414 | 1 | 426 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278950.1 | 0 | 35 | 413 | 33 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300505.1 | 0 | 14 | 347 | 1 | 332 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518930.1 | 0 | 1 | 410 | 1 | 403 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 29 | 349 | 2 | 316 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3f55_C | 0 | 29 | 349 | 2 | 316 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3f55_B | 0 | 29 | 349 | 2 | 316 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3f55_A | 0 | 29 | 349 | 2 | 316 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3em5_D | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |