| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra023384 |
| Family | GH127 |
| Protein Properties | Length: 864 Molecular Weight: 96264 Isoelectric Point: 6.5158 |
| Chromosome | Chromosome/Scaffold: 02 Start: 3121584 End: 3125680 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH127 | 358 | 631 | 5.8e-27 |
| LHKEISMFFMDIVNASHSYATGGTSVGEFWQDPKRLATTLQTENEESCTTYNMLKVSRNLFRWTKEVSYADYYERALTNGVLGIQRGTEPGKMIYMLPLG KGVSKAVTYHGWGTPYDAFWCCYGTGIESFSKLGDSIYFQEDGESPALYVTQYISSSLDWKSSGVSLSQTVKPVVSWDPYMRVTFTFSSSKGGMGKESTL NLRIPVWTNSESAKVSLNGQSLKVPASGNFLSIKQNWKSGNQVTMELPLSIRTEAIKDDRPEYASLQAILYGPY | |||
| Full Sequence |
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| Protein Sequence Length: 864 Download |
| MKFGLIVTVA LLLHITFLVC LAKECTNTPS QLSSHTFRNE LLRSNNESLK TEMFSHYHLT 60 PTDDSAWSSL LPRKMLREEE DEYSWTIMYR KIKNSDNSSG SFLKDVSLHD VRLDPSTFQW 120 RAQQTNLEYL LMLDVDGLSW SFRKAAGLVA PGDPYGGWEG PGSELRGHFV GHYLSATAYM 180 WASTHNETLK EKMSSLVSAL SACQEKVGTG YLSAFPSSFF DRFEAIKPVW APYYTIHKIL 240 AGLVDQYKLA GNSQALKMAT WMADYFYVRV RNVIKMYSVE RHWQSLNEET GGMNDVLYQI 300 YSITGDSKYL LLAHLFDKPC FLGVLAIQAD DISGFHSNTH IPIVVGSQLR YEITGDPLHK 360 EISMFFMDIV NASHSYATGG TSVGEFWQDP KRLATTLQTE NEESCTTYNM LKVSRNLFRW 420 TKEVSYADYY ERALTNGVLG IQRGTEPGKM IYMLPLGKGV SKAVTYHGWG TPYDAFWCCY 480 GTGIESFSKL GDSIYFQEDG ESPALYVTQY ISSSLDWKSS GVSLSQTVKP VVSWDPYMRV 540 TFTFSSSKGG MGKESTLNLR IPVWTNSESA KVSLNGQSLK VPASGNFLSI KQNWKSGNQV 600 TMELPLSIRT EAIKDDRPEY ASLQAILYGP YLLAGLTSRE WSITTQAKDN IWISSIPETH 660 NSHLVTLSQQ SGNVSYVLSN NNQTITIEAI PAPGTQAAVA ATFRLVTADD SKGGISTGPE 720 ELIGSQVMIE PFDFPGMLVT QATDSSLAVQ GSSSSDKEAS RFRLVAGVDG KQGSVSLMLE 780 SKKGCYVYSD QTMKAGMKLR LKCESDGTDE KFKEAASFVL RKGMSQYNPM SFVMNGAQRN 840 FVLSPLFSLR DETYNVYFSL QQT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 3.0e-71 | 108 | 635 | 538 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 0 | 110 | 634 | 533 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB88260.1 | 0 | 23 | 861 | 24 | 859 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_196799.1 | 0 | 23 | 861 | 25 | 860 | catalytic [Arabidopsis thaliana] |
| RefSeq | NP_196800.2 | 0 | 23 | 861 | 29 | 864 | catalytic [Arabidopsis thaliana] |
| RefSeq | XP_002285548.1 | 0 | 5 | 861 | 4 | 863 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 4 | 861 | 3 | 857 | predicted protein [Populus trichocarpa] |
