| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra023530 |
| Family | GT75 |
| Protein Properties | Length: 342 Molecular Weight: 38522.6 Isoelectric Point: 6.2515 |
| Chromosome | Chromosome/Scaffold: 02 Start: 3805054 End: 3806894 |
| Description | reversibly glycosylated polypeptide 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT75 | 18 | 141 | 0 |
| LKDELDIVIPTIRNLDFLEMWRPFLQPYHLIIVQDGDPTKKIHVPEGYDYELYNRNDINRILGPKASCISFKDSACRCFGYMMSKKKYIFTIDDDCFVAK DPSGKAVNALEQHIKNLLCPSTPF | |||
| GT75 | 143 | 331 | 0 |
| REGVTTAVSHGLWLNIPDYDAPTQLVKPKERNTRYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGLGV KTGLPYIYHSKASNPFVNLKKEYKGIFWQEEIIPFFQNAKLSKEATTVQQCYIELSKMVKEKLSSLDPYFDKLADAMVTWIEAWDELNP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 342 Download |
| MVDPANTVGL PVNPTPLLKD ELDIVIPTIR NLDFLEMWRP FLQPYHLIIV QDGDPTKKIH 60 VPEGYDYELY NRNDINRILG PKASCISFKD SACRCFGYMM SKKKYIFTID DDCFVAKDPS 120 GKAVNALEQH IKNLLCPSTP FLREGVTTAV SHGLWLNIPD YDAPTQLVKP KERNTRYVDA 180 VMTIPKGTLF PMCGMNLAFD RDLIGPAMYF GLMGDGQPIG RYDDMWAGWC IKVICDHLGL 240 GVKTGLPYIY HSKASNPFVN LKKEYKGIFW QEEIIPFFQN AKLSKEATTV QQCYIELSKM 300 VKEKLSSLDP YFDKLADAMV TWIEAWDELN PTAAAAANGK A* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13641 | Glyco_tranf_2_3 | 0.006 | 22 | 222 | 212 | + Glycosyltransferase like family 2. Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. | ||
| PLN03180 | PLN03180 | 0 | 12 | 332 | 343 | + reversibly glycosylated polypeptide; Provisional | ||
| pfam03214 | RGP | 0 | 17 | 331 | 342 | + Reversibly glycosylated polypeptide. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0007047 | : GO:0044234 |
| GO:0008466 | glycogenin glucosyltransferase activity |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030054 | cell junction |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC50001.1 | 0 | 1 | 341 | 1 | 363 | reversibly glycosylated polypeptide-2 [Arabidopsis thaliana] |
| GenBank | AAM65020.1 | 0 | 1 | 341 | 1 | 360 | reversibly glycosylated polypeptide-3 [Arabidopsis thaliana] |
| GenBank | ABD96835.1 | 0 | 1 | 341 | 1 | 363 | hypothetical protein [Cleome spinosa] |
| RefSeq | NP_186872.1 | 0 | 1 | 335 | 1 | 357 | RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1); cellulose synthase (UDP-forming) [Arabidopsis thaliana] |
| RefSeq | NP_197069.1 | 0 | 1 | 341 | 1 | 360 | RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2); transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CX109310 | 362 | 5 | 341 | 0 |
| HO779006 | 348 | 15 | 340 | 0 |
| HO852574 | 343 | 12 | 332 | 0 |
| HO810375 | 343 | 12 | 332 | 0 |
| HO646415 | 335 | 18 | 330 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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