| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra023571 |
| Family | GT75 |
| Protein Properties | Length: 107 Molecular Weight: 11771.5 Isoelectric Point: 5.7409 |
| Chromosome | Chromosome/Scaffold: 02 Start: 3967286 End: 3967606 |
| Description | Alpha-1,4-glucan-protein synthase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT75 | 1 | 104 | 1.1e-37 |
| MCLKHVVDHLGYGVKTGLPYVWRNERGDAVESVRKKWEGMKLMEKSVPFFESLKLPESAVTVEDCVVEVAKAVKEQLGSGDPAFTQAADATMVKWVQLWS EVNS | |||
| Full Sequence |
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| Protein Sequence Length: 107 Download |
| MCLKHVVDHL GYGVKTGLPY VWRNERGDAV ESVRKKWEGM KLMEKSVPFF ESLKLPESAV 60 TVEDCVVEVA KAVKEQLGSG DPAFTQAADA TMVKWVQLWS EVNSSG* 120 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03180 | PLN03180 | 1.0e-50 | 1 | 105 | 105 | + reversibly glycosylated polypeptide; Provisional | ||
| pfam03214 | RGP | 1.0e-57 | 1 | 105 | 105 | + Reversibly glycosylated polypeptide. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0007047 | : GO:0044234 |
| GO:0008466 | glycogenin glucosyltransferase activity |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030054 | cell junction |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD28560.1 | 8.00001e-42 | 1 | 105 | 244 | 347 | Alpha-1,4-glucan-protein synthase (UDP-forming) [Medicago truncatula] |
| RefSeq | NP_197155.1 | 0 | 1 | 106 | 244 | 348 | reversibly glycosylated polypeptide, putative [Arabidopsis thaliana] |
| RefSeq | XP_002325896.1 | 4e-38 | 1 | 104 | 244 | 346 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002332719.1 | 3e-38 | 1 | 104 | 244 | 346 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512611.1 | 1e-38 | 1 | 104 | 244 | 346 | Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EW720786 | 107 | 1 | 107 | 0 |
| EX909930 | 107 | 1 | 107 | 0 |
| EX769538 | 107 | 1 | 107 | 0 |
| FY442484 | 107 | 1 | 107 | 0 |
| BY816896 | 107 | 1 | 107 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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