| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra023639 |
| Family | AA2 |
| Protein Properties | Length: 311 Molecular Weight: 33874.9 Isoelectric Point: 10.6466 |
| Chromosome | Chromosome/Scaffold: 02 Start: 4330059 End: 4331614 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 47 | 293 | 0 |
| VDPTVTAALLRMHFHDCFVRGCDASLLIDSTNSEKTAGPNGSVREFDLIDRIKAQLEAACPSTVSCADIITLATRDSVALAGGPSYSIPTGRRDGLVSNN VDVALPGPTISVAGAVSLFTNKGMNVFDAVALLGAHTVGQGNCGLFNDRITNFQGTGRPDPSMDPALVSSLRNTCRNSASAALDQSTPLRFDNQFFKQLR KRRGVMQVDQRLATDRQTRGVVARYANNNAFFKRQFVRAMIKMGAVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 311 Download |
| MMKFSSLLVL FFIFPIALAQ LRVGFYSRSC PQAETIVRNL VRQRFGVDPT VTAALLRMHF 60 HDCFVRGCDA SLLIDSTNSE KTAGPNGSVR EFDLIDRIKA QLEAACPSTV SCADIITLAT 120 RDSVALAGGP SYSIPTGRRD GLVSNNVDVA LPGPTISVAG AVSLFTNKGM NVFDAVALLG 180 AHTVGQGNCG LFNDRITNFQ GTGRPDPSMD PALVSSLRNT CRNSASAALD QSTPLRFDNQ 240 FFKQLRKRRG VMQVDQRLAT DRQTRGVVAR YANNNAFFKR QFVRAMIKMG AVDVLTGRAG 300 EIRRNCRRFN * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 7.0e-5 | 243 | 274 | 32 | + Peroxidase. | ||
| cd00314 | plant_peroxidase_like | 2.0e-23 | 37 | 290 | 286 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 6.0e-65 | 37 | 184 | 150 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 8.0e-100 | 1 | 310 | 324 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 9.0e-165 | 20 | 309 | 298 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65434.1 | 0 | 3 | 310 | 5 | 312 | peroxidase ATP13a [Arabidopsis thaliana] |
| GenBank | AAM65659.1 | 0 | 1 | 310 | 3 | 321 | putative peroxidase [Arabidopsis thaliana] |
| DDBJ | BAD43693.1 | 0 | 22 | 310 | 24 | 321 | putative peroxidase [Arabidopsis thaliana] |
| RefSeq | NP_187017.1 | 0 | 22 | 310 | 24 | 321 | peroxidase, putative [Arabidopsis thaliana] |
| RefSeq | NP_197284.1 | 0 | 3 | 310 | 6 | 313 | peroxidase 57 (PER57) (P57) (PRXR10) [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 20 | 310 | 2 | 304 | A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose |
| PDB | 1pa2_A | 0 | 20 | 310 | 2 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 4a5g_B | 0 | 19 | 310 | 2 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 4a5g_A | 0 | 19 | 310 | 2 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1qgj_B | 0 | 20 | 310 | 1 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
