| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra023862 |
| Family | AA2 |
| Protein Properties | Length: 330 Molecular Weight: 36038.4 Isoelectric Point: 10.0394 |
| Chromosome | Chromosome/Scaffold: 01 Start: 20536678 End: 20538382 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 48 | 310 | 0 |
| HIQKHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGNAERDAPPNLTLRGFGFVERIKTLLEAECPKTVSCADIIALTARDSVVATGGPWWSVPTG RRDGRISKLAEATNNIPGPTSNFTTLQQRFAKQGLNLKDLVLLSGAHTIGVSHCSSMSERLYNFSTTVKQDPSLDSEYAANIKANKCKSLTDNTTILEMD PGSSRSFDLSYYRLVLKRRGLFQSDSALTKNLATLKMINDLVNGSEKKFYKAFAKSMEKMGRV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 330 Download |
| MKTTNRFNVI VAVAATILMG MFESSDAQLQ MNFYAKSCPN AEKIISDHIQ KHIHNGPSLA 60 APLIRMHFHD CFVRGCDGSV LINSTSGNAE RDAPPNLTLR GFGFVERIKT LLEAECPKTV 120 SCADIIALTA RDSVVATGGP WWSVPTGRRD GRISKLAEAT NNIPGPTSNF TTLQQRFAKQ 180 GLNLKDLVLL SGAHTIGVSH CSSMSERLYN FSTTVKQDPS LDSEYAANIK ANKCKSLTDN 240 TTILEMDPGS SRSFDLSYYR LVLKRRGLFQ SDSALTKNLA TLKMINDLVN GSEKKFYKAF 300 AKSMEKMGRV KVKTGSAGVI RTRCSVARS* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd08201 | plant_peroxidase_like_1 | 1.0e-9 | 56 | 232 | 195 | + Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. | ||
| cd00314 | plant_peroxidase_like | 7.0e-24 | 45 | 309 | 280 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 5.0e-68 | 45 | 196 | 153 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 2.0e-91 | 7 | 325 | 323 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 2.0e-164 | 28 | 326 | 300 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61382.1 | 0 | 6 | 329 | 3 | 326 | putative peroxidase [Arabidopsis thaliana] |
| GenBank | ACT35472.1 | 0 | 2 | 329 | 19 | 354 | peroxidase 30 [Brassica rapa] |
| EMBL | CAA66965.1 | 0 | 1 | 327 | 1 | 327 | peroxidase [Arabidopsis thaliana] |
| EMBL | CAA67360.1 | 0 | 6 | 327 | 3 | 324 | peroxidase ATP7a [Arabidopsis thaliana] |
| RefSeq | NP_188814.1 | 0 | 1 | 329 | 1 | 329 | peroxidase 30 (PER30) (P30) (PRXR9) [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3hdl_A | 0 | 29 | 329 | 2 | 304 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1qo4_A | 0 | 28 | 324 | 2 | 300 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1pa2_A | 0 | 28 | 324 | 2 | 300 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1gx2_B | 0 | 28 | 329 | 2 | 307 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 1gx2_A | 0 | 28 | 329 | 2 | 307 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
