| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra024033 |
| Family | AA2 |
| Protein Properties | Length: 395 Molecular Weight: 43540.2 Isoelectric Point: 5.4543 |
| Chromosome | Chromosome/Scaffold: 03 Start: 28077037 End: 28078622 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 83 | 372 | 0 |
| KARPSIAPSLIRLLFHDCFIEGCDASVLVDADESQTSEKEAPPNLSLKGLDVIAFIKSELENTCPGVVSCADTLALATKEAVSLAGGPKYSLRIGRKDSL VTFKDIAQRELPSPHATLSEILARFASRGFSPQETVSLLGAHSIGITHCTFFQDRLYNFSGTGKPDPELNTGFLQELKSKCPFSASASSPSPCPDTASAP SLPASDYHTNYGLSSENQIDGTIDLSFNNEGGYLNFGSRYYRRLLQNKGVMFSDQQLMASEETETWVRAYASDPLLFQRDFIKSMVKLSS | |||
| Full Sequence |
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| Protein Sequence Length: 395 Download |
| MNFFISASLA FFVLSIYTAH YIVELHKTTK DSAERDFVSK TSLYVSIEEE EDVSYSPLQQ 60 DYYRDSCPSA ERIIRKALKE IYKARPSIAP SLIRLLFHDC FIEGCDASVL VDADESQTSE 120 KEAPPNLSLK GLDVIAFIKS ELENTCPGVV SCADTLALAT KEAVSLAGGP KYSLRIGRKD 180 SLVTFKDIAQ RELPSPHATL SEILARFASR GFSPQETVSL LGAHSIGITH CTFFQDRLYN 240 FSGTGKPDPE LNTGFLQELK SKCPFSASAS SPSPCPDTAS APSLPASDYH TNYGLSSENQ 300 IDGTIDLSFN NEGGYLNFGS RYYRRLLQNK GVMFSDQQLM ASEETETWVR AYASDPLLFQ 360 RDFIKSMVKL SSYHVLTGPL GQVRTNCSKV LPLN* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00314 | plant_peroxidase_like | 9.0e-21 | 74 | 242 | 184 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 1.0e-58 | 74 | 226 | 154 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 3.0e-68 | 62 | 390 | 334 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 2.0e-138 | 58 | 390 | 333 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI36139.1 | 0 | 58 | 390 | 71 | 403 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_195113.1 | 0 | 43 | 394 | 55 | 358 | peroxidase, putative [Arabidopsis thaliana] |
| Swiss-Prot | O81755 | 0 | 43 | 394 | 55 | 404 | PER48_ARATH RecName: Full=Putative Peroxidase 48; Short=Atperox P48; Flags: Precursor |
| RefSeq | XP_002279534.1 | 0 | 58 | 390 | 71 | 368 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298218.1 | 0 | 48 | 390 | 3 | 308 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 58 | 390 | 3 | 303 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1pa2_A | 0 | 58 | 390 | 3 | 303 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1qgj_B | 0 | 58 | 387 | 2 | 295 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1qgj_A | 0 | 58 | 387 | 2 | 295 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 4a5g_B | 0 | 58 | 390 | 4 | 304 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX092668 | 256 | 1 | 256 | 0 |
| DT747438 | 307 | 88 | 390 | 0 |
| EV140160 | 202 | 191 | 392 | 0 |
| DT762021 | 296 | 47 | 341 | 0 |
| DR936526 | 206 | 58 | 263 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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