| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra024238 |
| Family | GH35 |
| Protein Properties | Length: 742 Molecular Weight: 82983.6 Isoelectric Point: 9.0296 |
| Chromosome | Chromosome/Scaffold: 06 Start: 14478050 End: 14481812 |
| Description | beta-galactosidase 10 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 40 | 342 | 0 |
| SIGGRRQLIISAAIHYPRSVPAMWPSLVQTAKEGGCNAIESYVFWNGHEPSPGKYYFGGRYDIVKFIKTVQQAGMHMILRIGPFVAAEWNFGGVPVWLHY VPGTVFRQDNEPWKHYMESFTTYMVNLLKKEKLFAPQGGPIILSQVENEYGYYERDYGEGGKRYAQWSASMAVSQNIGVPWMMCQQWDAPATVISTCNGF YCDEFTPNTADKPKIWTENWPGWFKTFGGRDPHRPAEDVAYSVARFFQKGGSVHNYYMYHGGTNFGRTSGGPFITTSYDYEAPIDEYGLPRLPKWGHLKN LHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 742 Download |
| MKRATNSIAS PAILVLAIVF LFSLKAIATG NVTYDHRSLS IGGRRQLIIS AAIHYPRSVP 60 AMWPSLVQTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY DIVKFIKTVQ QAGMHMILRI 120 GPFVAAEWNF GGVPVWLHYV PGTVFRQDNE PWKHYMESFT TYMVNLLKKE KLFAPQGGPI 180 ILSQVENEYG YYERDYGEGG KRYAQWSASM AVSQNIGVPW MMCQQWDAPA TVISTCNGFY 240 CDEFTPNTAD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFQKGG SVHNYYMYHG 300 GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKNL HKAIMLSENM LIGGEHRNFS 360 LGPSLEADVY TSSSGSCAAF LSNSDDKNDK TAVFQNMTYH LPAWSVSILP DCKNEVFNTA 420 KVTAKSSKVE MLPEDLKSSS GLKWQVFSEK PGIWGEADFV KNELVDHINT TKDTTDYLWY 480 TTSITISANE GFLKKQTLPV LFIESKGHTL HIFINKEYIG TATGNGTHVP FKLKKSVPLK 540 AGENNIDLLS MTVGLSNAGS FYEWVPAGLT SVSIKGLNNG TLNLTHTKWT YKLGVQGEQL 600 GLFKPGNSGA VKWTVTTKPP KKQPLTWYKV IIDPPSGSEP VGLDMISMGK GMAWLNGEEI 660 GRYWPRIARK NAPNDECVKE CDYRGKFMPD KCNTGCGEPS QRWYHVPRSW FKSSGNELVI 720 FEEKGGYPTK IKLSRRKVTE V* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 5.0e-17 | 32 | 334 | 345 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 9.0e-145 | 38 | 344 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 13 | 741 | 733 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD91080.1 | 0 | 31 | 741 | 28 | 742 | beta-D-galactosidase [Pyrus pyrifolia] |
| EMBL | CAB64746.1 | 0 | 2 | 741 | 3 | 741 | putative beta-galactosidase [Arabidopsis thaliana] |
| EMBL | CBI21600.1 | 0 | 29 | 741 | 20 | 737 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_201186.1 | 0 | 2 | 741 | 3 | 741 | BGAL10 (beta-galactosidase 10); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002310540.1 | 0 | 14 | 741 | 1 | 717 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 3.00004e-41 | 26 | 340 | 2 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1e-33 | 32 | 327 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 1e-33 | 32 | 327 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 1e-33 | 32 | 327 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
