| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra024558 |
| Family | AA1 |
| Protein Properties | Length: 582 Molecular Weight: 65696.2 Isoelectric Point: 7.6053 |
| Chromosome | Chromosome/Scaffold: 09 Start: 24423344 End: 24425893 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 99 | 351 | 1.3e-21 |
| TVPGPTIEAVYGVDTYVTWRNHLPSSHILPLDLTISPAAPKYGGIPTVVHLHGGIHEPSSDGNADAWFTAGFRETGPKWTKTTMHYENMQQPGNMWYHDH AMGLTRVNLLAGLVGAYILRHNTVEAPLRLPTGNEFDRPLVVFDRSFRKDGSIYMNATGNNPSIHPQWQPEYFGDAIIVNGKAWPRLSVRRRKYRFRIIN ASNARFFRFFFSNGLDFVVVGSDSAYLSKPVTTKSVLLSPSEIVDVVVDFSKS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 582 Download |
| MDSMLCRRRM NIAMVLILTL TWLGGICGEF EEQLFEVGKL KMFVDELPDM PRLHGFHSVH 60 GVLKPISLQI GMFYTKWKFH RDLPPTPVFA YGTSRRSATV PGPTIEAVYG VDTYVTWRNH 120 LPSSHILPLD LTISPAAPKY GGIPTVVHLH GGIHEPSSDG NADAWFTAGF RETGPKWTKT 180 TMHYENMQQP GNMWYHDHAM GLTRVNLLAG LVGAYILRHN TVEAPLRLPT GNEFDRPLVV 240 FDRSFRKDGS IYMNATGNNP SIHPQWQPEY FGDAIIVNGK AWPRLSVRRR KYRFRIINAS 300 NARFFRFFFS NGLDFVVVGS DSAYLSKPVT TKSVLLSPSE IVDVVVDFSK SPSRTVVLAN 360 DAPYPYPGGD PVNEESGKVM KFIVSDDYEA DTWTIPNKLI NYPPADVSNA VLTRYISMYE 420 YVSDSDEPTH LYVNGLPYDA PVTETPKAGT TEVWEVINLT EDNHPLHIHL GLFKVVEQTA 480 LLAAGLEEFT GCMTKYNDAV MCRISKYARG KKTAVTAHER GWKNVFKMMP GHVTRILVRF 540 SYIHSNASYP FDPTQEPGYV YHCHILDHED NMMMRPLKVI K* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 9.0e-8 | 99 | 218 | 122 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PRK10965 | PRK10965 | 7.0e-9 | 433 | 574 | 146 | + multicopper oxidase; Provisional | ||
| pfam07731 | Cu-oxidase_2 | 4.0e-9 | 428 | 579 | 165 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PRK10965 | PRK10965 | 8.0e-10 | 101 | 350 | 259 | + multicopper oxidase; Provisional | ||
| COG2132 | SufI | 7.0e-34 | 98 | 579 | 491 | + Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB72167.1 | 0 | 14 | 580 | 1 | 567 | unknown [Arabidopsis thaliana] |
| GenBank | ABG81319.1 | 0 | 1 | 580 | 1 | 580 | low-phosphate root 1 [Arabidopsis thaliana] |
| GenBank | ABG81320.1 | 0 | 1 | 580 | 1 | 580 | low-phosphate root 1 [Arabidopsis thaliana] |
| DDBJ | BAC42623.1 | 0 | 1 | 580 | 1 | 580 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_173714.2 | 0 | 1 | 580 | 1 | 580 | LPR1 (Low Phosphate Root1); copper ion binding / oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3zdw_A | 0 | 40 | 579 | 3 | 508 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2x88_A | 0 | 40 | 579 | 3 | 508 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2x87_A | 0 | 40 | 579 | 3 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
| PDB | 2bhf_A | 0 | 40 | 579 | 3 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
| PDB | 1w8e_A | 0 | 40 | 579 | 3 | 508 | A Chain A, Crystal Structure Of The Reconstituted Cota |
