| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra024571 |
| Family | GH9 |
| Protein Properties | Length: 495 Molecular Weight: 54519.4 Isoelectric Point: 9.0888 |
| Chromosome | Chromosome/Scaffold: 09 Start: 24326873 End: 24329005 |
| Description | glycosyl hydrolase 9B6 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 33 | 487 | 0 |
| DYRDALKKSILFFEGQRSGKLPPDQRLKWRRDSGLRDGSSAGVDLTGGYYDAGDNVKFGFPMAFTTTMMSWSVIDFGKTMGPELENAVKAIKWGTDYLLK ATAIPSVVFVQVGDAYSDHNCWERPEDMDTLRTVYKVDKDHPGSEVAGETAAALAAASIVFAKRDPAYSKRLLDRAARVFAFANKYRGAYSDSLRQAVCP FYCNFNGYEDELLWGAAWLHKASKKRVYRLYIVKNKEILRAGDTIHEFGWDNKHAGINVLISKMVLMGKADYFQSFKQNADEFICSLLPGISHPQVEYSL GGLLVKSGGSNMQHVTSLSFLLLTYSNYLSHAKKVVPCGQFTASPALLRQVAKRQVDYILGDNPMKMSYMVGYGSRFPQRIHHRGSSVPSVVDHPARIGC KEGSRYFLSPNPNPNLLIGAVVGGPNVTDDFPDSRPYFQLTEPTTYINAPLLGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 495 Download |
| MAGKSLTLSG LAPAAAIILA LLLLSPEICT GHDYRDALKK SILFFEGQRS GKLPPDQRLK 60 WRRDSGLRDG SSAGVDLTGG YYDAGDNVKF GFPMAFTTTM MSWSVIDFGK TMGPELENAV 120 KAIKWGTDYL LKATAIPSVV FVQVGDAYSD HNCWERPEDM DTLRTVYKVD KDHPGSEVAG 180 ETAAALAAAS IVFAKRDPAY SKRLLDRAAR VFAFANKYRG AYSDSLRQAV CPFYCNFNGY 240 EDELLWGAAW LHKASKKRVY RLYIVKNKEI LRAGDTIHEF GWDNKHAGIN VLISKMVLMG 300 KADYFQSFKQ NADEFICSLL PGISHPQVEY SLGGLLVKSG GSNMQHVTSL SFLLLTYSNY 360 LSHAKKVVPC GQFTASPALL RQVAKRQVDY ILGDNPMKMS YMVGYGSRFP QRIHHRGSSV 420 PSVVDHPARI GCKEGSRYFL SPNPNPNLLI GAVVGGPNVT DDFPDSRPYF QLTEPTTYIN 480 APLLGLLSYF SAHA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02308 | PLN02308 | 0 | 27 | 493 | 467 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 32 | 494 | 463 | + endoglucanase | ||
| PLN03009 | PLN03009 | 0 | 32 | 493 | 465 | + cellulase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 33 | 488 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN02613 | PLN02613 | 0 | 33 | 485 | 457 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA67157.1 | 0 | 1 | 494 | 1 | 489 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_173735.1 | 0 | 1 | 493 | 1 | 488 | AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_177228.1 | 0 | 32 | 494 | 27 | 489 | ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002311518.1 | 0 | 1 | 493 | 1 | 495 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527779.1 | 0 | 14 | 494 | 11 | 492 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 32 | 488 | 3 | 426 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1ksc_A | 0 | 32 | 488 | 3 | 426 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1ks8_A | 0 | 32 | 488 | 3 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 33 | 481 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 33 | 481 | 5 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
