| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra024671 |
| Family | AA6 |
| Protein Properties | Length: 223 Molecular Weight: 24906.7 Isoelectric Point: 8.9626 |
| Chromosome | Chromosome/Scaffold: 09 Start: 23672580 End: 23674831 |
| Description | Quinone reductase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA6 | 69 | 188 | 3e-35 |
| MYYSIYRHVENLAQEIRKLRCWLLLMVSMPNSGRSVPETLQEDLLSKMSAPPKSDAPLVTPNDLAEADGFVFGFPTRFSMMAAQFKVFLDATGGLRRTQQ LAGNLAGILYSTRSQGGGQN | |||
| Full Sequence |
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| Protein Sequence Length: 223 Download |
| MAVECTSNVY IIEYATVIKP CASGWMVARW SSVANQAKFE SDYTQISLTR GHRCFNILLP 60 GSDLPFLFMY YSIYRHVENL AQEIRKLRCW LLLMVSMPNS GRSVPETLQE DLLSKMSAPP 120 KSDAPLVTPN DLAEADGFVF GFPTRFSMMA AQFKVFLDAT GGLRRTQQLA GNLAGILYST 180 RSQGGGQNRV NRLSGKQKLA ITAVQNPFIC EDRFIHFSQF QL* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03358 | FMN_red | 2.0e-6 | 132 | 193 | 62 | + NADPH-dependent FMN reductase. | ||
| COG0655 | WrbA | 2.0e-12 | 132 | 187 | 57 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 7.0e-23 | 67 | 187 | 125 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 1.0e-27 | 67 | 187 | 130 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN12321.1 | 0 | 69 | 188 | 8 | 124 | benzoquinone reductase [Gossypium hirsutum] |
| GenBank | ACU13985.1 | 0 | 69 | 188 | 8 | 124 | unknown [Glycine max] |
| RefSeq | NP_194457.2 | 0 | 69 | 188 | 8 | 124 | quinone reductase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002283286.1 | 0 | 69 | 188 | 8 | 124 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002534445.1 | 0 | 69 | 188 | 8 | 124 | Minor allergen Alt a, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3b6m_B | 2e-18 | 67 | 190 | 5 | 123 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 3b6m_A | 2e-18 | 67 | 190 | 5 | 123 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 3b6k_B | 2e-18 | 67 | 190 | 5 | 123 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 3b6k_A | 2e-18 | 67 | 190 | 5 | 123 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 3b6j_B | 2e-18 | 67 | 190 | 5 | 123 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AV553406 | 120 | 69 | 188 | 0 |
| CF652841 | 119 | 70 | 188 | 0 |
| DT022462 | 129 | 69 | 188 | 0 |
| FY919046 | 129 | 69 | 188 | 0 |
| DT020099 | 129 | 69 | 188 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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