| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra024910 |
| Family | GT8 |
| Protein Properties | Length: 660 Molecular Weight: 75719.4 Isoelectric Point: 9.1367 |
| Chromosome | Chromosome/Scaffold: 06 Start: 24221747 End: 24224495 |
| Description | galacturonosyltransferase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 321 | 631 | 0 |
| CLPLRLTTDYYALNSSEQQFPNQEKLEDNQLYHYALFSDNVLAASVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLDNPPGKATIQVQNVEEFTWL NSSYSPVLKQLSSRSMIDYYFRAHHTNSDANLKFRNPKYLSILNHLRFYLPEIFPKLSKVLFLDDDIVVQKDLSGLWSVDLKGNVNGAVETCGESFHRFD RYLNFSNPLISKNFDPRACGWAYGMNVFDLDEWKRQNITEVYHRWQNLNQDRELWKLGTLPPGLITFWKRTYPLERRWHVLGLGYNPSVNQRDIERAAVV HYNGNLKPWLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 660 Download |
| MVTFRNLVLF LLLLTVAAPI LLYTDPSASF TTTPSSKRDF LDEVTALVSI ILFPSIDVFF 60 KVYSFLTLFL IQSFNSDGNH LNLLPRESPA VVRRDVVGVV YSTQDSDSSR RQETRGDQFS 120 ARVLSATDDE TQSQTVNPIQ QVTDAASKVV DKPSDMHVSA DTSQAREKMK VQLTEKATEK 180 VDEQEPKDSG AEKERGNVVM PDAQVRHLKD QLIRAKVYLS LPAAKANPHF VRELRLRVKE 240 VQRVVLDASK DSDLPKNAVE KLKAMEQTLA KGKQIQDDCS TVVKKLRAML HSAEEQLRVH 300 KKQTMFLTQL TAKTIPKGLH CLPLRLTTDY YALNSSEQQF PNQEKLEDNQ LYHYALFSDN 360 VLAASVVVNS TVTNAKHPSK HVFHIVTDRL NYAAMRMWFL DNPPGKATIQ VQNVEEFTWL 420 NSSYSPVLKQ LSSRSMIDYY FRAHHTNSDA NLKFRNPKYL SILNHLRFYL PEIFPKLSKV 480 LFLDDDIVVQ KDLSGLWSVD LKGNVNGAVE TCGESFHRFD RYLNFSNPLI SKNFDPRACG 540 WAYGMNVFDL DEWKRQNITE VYHRWQNLNQ DRELWKLGTL PPGLITFWKR TYPLERRWHV 600 LGLGYNPSVN QRDIERAAVV HYNGNLKPWL EIGLPKYRGI WSKHVDYQHV YLRECNINP* 660 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02829 | PLN02829 | 0 | 23 | 659 | 644 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 0 | 87 | 658 | 583 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02718 | PLN02718 | 0 | 118 | 657 | 547 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 0 | 201 | 657 | 462 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 0 | 254 | 659 | 411 | + galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN08854.1 | 0 | 1 | 659 | 1 | 680 | Glycosyl transferase, family 8 [Medicago truncatula] |
| DDBJ | BAB11325.1 | 0 | 1 | 659 | 1 | 615 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_568688.1 | 0 | 1 | 659 | 2 | 616 | GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002329942.1 | 0 | 4 | 659 | 24 | 665 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
| RefSeq | XP_002525229.1 | 0 | 2 | 659 | 3 | 647 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.0008 | 456 | 629 | 75 | 252 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1g9r_A | 0.0008 | 456 | 629 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1ss9_A | 0.002 | 456 | 629 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
