| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra025268 |
| Family | GT92 |
| Protein Properties | Length: 565 Molecular Weight: 64576.9 Isoelectric Point: 8.8353 |
| Chromosome | Chromosome/Scaffold: 06 Start: 22481353 End: 22483118 |
| Description | zinc finger (C3HC4-type RING finger) family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT92 | 278 | 489 | 4.9e-21 |
| FEMCVCTMTRNAAAVLREWVMYHAGIGVQRWFIYDNNSDDDIIAEIKYLERRGYNVSRHFWPWIKTQEAGFSNCAIRARNDCDWIAFIDVDEFYYIRSGE SLTSIIRNYTASAEIGEIRTPCHSFGPSGLRNRPRGGVTEGYTCRVILPERHKSILKPESMNATLINVVHHFHLKDGFTFADVDKEVMVINHYKYQVWEV FKEKFYRRVATY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MKIRRKLGGV CGSDVVVSWR LFFWFVVLFV FSFVLFSTMF VFKGKFRPVV RSVRSFSTAR 60 AVIGDSATLS PAVSIREAVK LPEQTLVFLK YPQSLRLFTK DDLICVFSSG EDSSKLRKEK 120 PEAVDGDKFG GQIVRCPETP PGYTVSLAIS RWTMDDHLAA GPTHQWDWLV YDAVIDHDNS 180 TVVFVKGLNL KPGKVADVSR YECVYGWDFA KHNRLIRSDV ISAAQEIVRC RTPLTVLNGP 240 KSAHGPVKVS VRIKGGTGML PSIAQPDRIV HPPRRKPFEM CVCTMTRNAA AVLREWVMYH 300 AGIGVQRWFI YDNNSDDDII AEIKYLERRG YNVSRHFWPW IKTQEAGFSN CAIRARNDCD 360 WIAFIDVDEF YYIRSGESLT SIIRNYTASA EIGEIRTPCH SFGPSGLRNR PRGGVTEGYT 420 CRVILPERHK SILKPESMNA TLINVVHHFH LKDGFTFADV DKEVMVINHY KYQVWEVFKE 480 KFYRRVATYV ADWQNDENVG SRDRAPGLGT RPVEPPDWAE RFCEVNDTGL RDQVLEKFKD 540 NKLQRLIWEK EEDEGSRQAH NRID* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13704 | Glyco_tranf_2_4 | 2.0e-11 | 287 | 377 | 93 | + Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, | ||
| pfam01697 | Glyco_transf_92 | 3.0e-46 | 276 | 481 | 233 | + Glycosyltransferase family 92. Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL08261.1 | 0 | 1 | 554 | 1 | 559 | AT5g40720/MNF13_240 [Arabidopsis thaliana] |
| DDBJ | BAA95709.1 | 0 | 43 | 563 | 43 | 569 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189369.1 | 0 | 43 | 558 | 43 | 558 | zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] |
| RefSeq | NP_198888.1 | 0 | 1 | 554 | 1 | 559 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002300081.1 | 0 | 1 | 550 | 1 | 553 | predicted protein [Populus trichocarpa] |
