| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra025325 |
| Family | GT8 |
| Protein Properties | Length: 364 Molecular Weight: 40905.9 Isoelectric Point: 7.5808 |
| Chromosome | Chromosome/Scaffold: 06 Start: 22163418 End: 22164509 |
| Description | galacturonosyltransferase-like 10 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 70 | 328 | 0 |
| IHIAMTLDPAYLRGTVSAVHSILKHTSCPQNIFFHFIASGPHHGPLAKTLSSVFPSLSFKVYTFDETIVKNLISSSIRQALDSPLNYARSYLSEILSTCV HRVIYLDSDVIVVDDIKKLWKVSLTGSRTIGAPEYCHANFTKYFSDRFWSNPKLSGVFESKTPCYFNTGVMVIDLERWREGEYTKKIENWMKIQKEERIY ELGSLPPFLLVFSGEIEAIDHQWNQHGLGGDNVVSSCRSLHPGPVSLIHWSGKGKPWVR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 364 Download |
| MMSSSRLIII FTIISAAFLT VGSIRLVPDD KSSFNDGSSD FMEAPGYQNG PKCSVLPQNK 60 LLLACDPSAI HIAMTLDPAY LRGTVSAVHS ILKHTSCPQN IFFHFIASGP HHGPLAKTLS 120 SVFPSLSFKV YTFDETIVKN LISSSIRQAL DSPLNYARSY LSEILSTCVH RVIYLDSDVI 180 VVDDIKKLWK VSLTGSRTIG APEYCHANFT KYFSDRFWSN PKLSGVFESK TPCYFNTGVM 240 VIDLERWREG EYTKKIENWM KIQKEERIYE LGSLPPFLLV FSGEIEAIDH QWNQHGLGGD 300 NVVSSCRSLH PGPVSLIHWS GKGKPWVRLD DGKACPVDYL WAPYDLHKSR RQYLQYSQDL 360 DIL* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02523 | PLN02523 | 8.0e-15 | 152 | 327 | 176 | + galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 2.0e-16 | 83 | 344 | 291 | + Probable galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 1.0e-17 | 152 | 329 | 180 | + Probable galacturonosyltransferase | ||
| cd06429 | GT8_like_1 | 3.0e-21 | 70 | 329 | 279 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| pfam01501 | Glyco_transf_8 | 3.0e-50 | 71 | 330 | 263 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG43554.1 | 0 | 1 | 348 | 2 | 348 | AF211536_1 Avr9/Cf-9 rapidly elicited protein 231 [Nicotiana tabacum] |
| RefSeq | NP_189474.2 | 0 | 1 | 363 | 1 | 365 | GATL10 (Galacturonosyltransferase-like 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_564983.1 | 0 | 32 | 350 | 44 | 365 | LGT8 (GLUCOSYL TRANSFERASE FAMILY 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002281766.1 | 0 | 41 | 355 | 50 | 368 | PREDICTED: similar to Avr9/Cf-9 rapidly elicited protein 231 [Vitis vinifera] |
| RefSeq | XP_002517421.1 | 0 | 36 | 348 | 33 | 348 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.0000001 | 152 | 328 | 80 | 254 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1g9r_A | 0.0000001 | 152 | 328 | 80 | 254 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1ss9_A | 0.0000001 | 152 | 328 | 80 | 254 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
