| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra025627 |
| Family | GT14 |
| Protein Properties | Length: 428 Molecular Weight: 49080.2 Isoelectric Point: 9.5042 |
| Chromosome | Chromosome/Scaffold: 04 Start: 7404323 End: 7406061 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 81 | 336 | 0 |
| FAYLISGSAGDGKSLRRTLLALYHPSNRYVVHLDRASSEEEREELNGYIRSSSLFRRFRNVDMIEKANLVTYRGPTMVANTLHAAAILLREGAEWDWFIN LSSSDYPLMSQDDLLHVFSHLPRDLNFIDHTSNIGWKASQRAKPVIIDPGLYLNKKSDVFWVKQRRSIPTAFKLFTGSAWMALSRPFIDYCIWGWDNLPR TVLMYYSNFLSSPEGYFHTVLCNAEEFKNTTVNSDLHFIAWDNPPKQHPHHLTLAD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 428 Download |
| MKKLRSYYSN VRHHQKHHHP ERTRWWWLLL PSLFFLLFLT TGPRFLPFTR PVLLTGSEPP 60 SFVESKIKPK PVSPPPAPPR FAYLISGSAG DGKSLRRTLL ALYHPSNRYV VHLDRASSEE 120 EREELNGYIR SSSLFRRFRN VDMIEKANLV TYRGPTMVAN TLHAAAILLR EGAEWDWFIN 180 LSSSDYPLMS QDDLLHVFSH LPRDLNFIDH TSNIGWKASQ RAKPVIIDPG LYLNKKSDVF 240 WVKQRRSIPT AFKLFTGSAW MALSRPFIDY CIWGWDNLPR TVLMYYSNFL SSPEGYFHTV 300 LCNAEEFKNT TVNSDLHFIA WDNPPKQHPH HLTLADMDRM VNSNAPFARK FRREDPVLDT 360 IDEELLNRGP GMPTPGGWCI GSHENGTDPC AVIGDTDVIR PGLGARRLET LVTSLLSPEN 420 FRPKQCK* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 4.0e-79 | 81 | 341 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 80 | 427 | 348 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_197009.1 | 0 | 1 | 427 | 1 | 434 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | NP_198815.1 | 0 | 40 | 427 | 60 | 447 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002282083.1 | 0 | 42 | 427 | 46 | 428 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324028.1 | 0 | 1 | 427 | 1 | 428 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517446.1 | 0 | 1 | 427 | 1 | 430 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.00000005 | 95 | 369 | 99 | 385 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.00000005 | 95 | 369 | 99 | 385 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.00000005 | 95 | 369 | 99 | 385 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.00000005 | 95 | 369 | 99 | 385 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0000001 | 95 | 369 | 99 | 385 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
