| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra025783 |
| Family | GH9 |
| Protein Properties | Length: 526 Molecular Weight: 57739.9 Isoelectric Point: 5.4433 |
| Chromosome | Chromosome/Scaffold: 06 Start: 7984212 End: 7987596 |
| Description | glycosyl hydrolase 9B5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 57 | 511 | 0 |
| NYADALKIAMQFFDIQKSGKLENNKITWRGDSGLEDGSEAGLDLSKGLYDAGDHMKFGFPMAFTATLLSWSILEYGHHMDSVNQLDPAKDSLKWITDFLI HAHPSANLLYIQVGDPETDHKCWDRPETMSTKRTLTKIDTETPGTEVAAETAAAMAAASLVFKQSDPKYSSTLLKHAKQLFGFADNHRGSYSVNIPKVQS YYNSTGYGDELLWAASWLYHATEDKTYLDFVSKNGDEFGNFGSPSWFSWDNKLPGTQILLSRLTFFKKDLSGSKGLQGYKETAEAVMCGLIPSSPTATSS RTEGGLIWVAEWNALQQPVSSSFLATLYSDYMLTSGIENLACGDTSFKPSDLRKFARSQADYMLGKNPEKMSYLVGYGDKYPEYVHHRGASIPADANTGC KDGFEWLNSEEPNPNVAYGALVGGPFLNDTFIDARNNSMQNEPSTYNSALVVGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 526 Download |
| MGEKSSSRCC CCSWFIGIIV LIAVVLAIVF TIRHNKSNKH PDDGADIVPL PGSIDKNYAD 60 ALKIAMQFFD IQKSGKLENN KITWRGDSGL EDGSEAGLDL SKGLYDAGDH MKFGFPMAFT 120 ATLLSWSILE YGHHMDSVNQ LDPAKDSLKW ITDFLIHAHP SANLLYIQVG DPETDHKCWD 180 RPETMSTKRT LTKIDTETPG TEVAAETAAA MAAASLVFKQ SDPKYSSTLL KHAKQLFGFA 240 DNHRGSYSVN IPKVQSYYNS TGYGDELLWA ASWLYHATED KTYLDFVSKN GDEFGNFGSP 300 SWFSWDNKLP GTQILLSRLT FFKKDLSGSK GLQGYKETAE AVMCGLIPSS PTATSSRTEG 360 GLIWVAEWNA LQQPVSSSFL ATLYSDYMLT SGIENLACGD TSFKPSDLRK FARSQADYML 420 GKNPEKMSYL VGYGDKYPEY VHHRGASIPA DANTGCKDGF EWLNSEEPNP NVAYGALVGG 480 PFLNDTFIDA RNNSMQNEPS TYNSALVVGL LSSLVTTSTS LKSFM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 5.0e-152 | 52 | 503 | 458 | + endoglucanase | ||
| PLN02340 | PLN02340 | 2.0e-153 | 57 | 500 | 451 | + endoglucanase | ||
| PLN02171 | PLN02171 | 2.0e-154 | 57 | 503 | 455 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-166 | 57 | 502 | 451 | + Glycosyl hydrolase family 9. | ||
| PLN02345 | PLN02345 | 0 | 61 | 503 | 447 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM63477.1 | 0 | 53 | 524 | 53 | 524 | endo-beta-1,4-glucanase, putative [Arabidopsis thaliana] |
| RefSeq | NP_173423.1 | 0 | 36 | 524 | 35 | 515 | AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_177697.1 | 0 | 53 | 524 | 53 | 524 | AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002276739.1 | 0 | 36 | 524 | 33 | 524 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002510516.1 | 0 | 34 | 524 | 36 | 522 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 57 | 515 | 4 | 429 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1ksc_A | 0 | 57 | 515 | 4 | 429 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1ks8_A | 0 | 57 | 515 | 4 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 57 | 515 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 57 | 515 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
