| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra025818 |
| Family | AA1 |
| Protein Properties | Length: 552 Molecular Weight: 61142.5 Isoelectric Point: 8.5561 |
| Chromosome | Chromosome/Scaffold: 06 Start: 8204546 End: 8210684 |
| Description | SKU5 similar 7 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 50 | 500 | 0 |
| QQQGILINKMFPGPEILSVTNDNLIINVFNELDEPFLISWAGIQNRKNSFQDGVCGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGGIRI SSRPMIPVPFPPPADDYTVLIGDWYKTDHKALRAQLDNGGKLPPPDGILINGLSSGATLNIQPGNTYRLRISNVGLQNSLNFRIQNHEMTLVEVEGTHTL QNVYSSLDVHVGQSYSVLITANQPSKDYYIVVSSRLTPTVLTTTGVLHYSNSAEPVSGPIPAAPVPMSWSFNQARTIRTNLTASGPRPNPQGTYHYGMVN VTRTIKLVSSVGQIEGKQRYSVNSASFTPSDTPLKLADYFKIDGVYKPGSISDQPPYAPTFPVTSVLQADYKAFVEIVFENSEDIVQSWHFNGHSFFVVG MELGKWRPGRRKVYNLNDAVSRCTIQVYPRSWTAIYVGLDNVGMWNLRSEL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 552 Download |
| MKNTKIAAKC KIAYAFVIGL SLLIATAAED PYIFYEWHVT YGTISPMGVQ QQGILINKMF 60 PGPEILSVTN DNLIINVFNE LDEPFLISWA GIQNRKNSFQ DGVCGTTCPI PPGKNYTYAL 120 QVKDQIGSFY YFPSLGFHKA AGGFGGIRIS SRPMIPVPFP PPADDYTVLI GDWYKTDHKA 180 LRAQLDNGGK LPPPDGILIN GLSSGATLNI QPGNTYRLRI SNVGLQNSLN FRIQNHEMTL 240 VEVEGTHTLQ NVYSSLDVHV GQSYSVLITA NQPSKDYYIV VSSRLTPTVL TTTGVLHYSN 300 SAEPVSGPIP AAPVPMSWSF NQARTIRTNL TASGPRPNPQ GTYHYGMVNV TRTIKLVSSV 360 GQIEGKQRYS VNSASFTPSD TPLKLADYFK IDGVYKPGSI SDQPPYAPTF PVTSVLQADY 420 KAFVEIVFEN SEDIVQSWHF NGHSFFVVGM ELGKWRPGRR KVYNLNDAVS RCTIQVYPRS 480 WTAIYVGLDN VGMWNLRSEL WERQYLGQQL YVRVYTNSTS LRDEYQIPTN ALLCGRASGA 540 HKELLLSGFE N* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 15 | 542 | 529 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 22 | 539 | 527 | + copper ion binding / oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 28 | 541 | 521 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 20 | 541 | 523 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 16 | 538 | 536 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL09733.1 | 0 | 6 | 539 | 1 | 535 | At1g76160/T23E18_10 [Arabidopsis thaliana] |
| GenBank | AAM97070.1 | 0 | 6 | 539 | 1 | 535 | pectinesterase, putative [Arabidopsis thaliana] |
| RefSeq | NP_173603.1 | 0 | 15 | 541 | 10 | 537 | sks8 (SKU5 Similar 8); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_173604.1 | 0 | 15 | 542 | 10 | 538 | sks7 (SKU5 Similar 7); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | NP_177743.1 | 0 | 6 | 539 | 1 | 535 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 35 | 545 | 6 | 546 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1asq_A | 0 | 35 | 545 | 6 | 546 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1asp_B | 0 | 35 | 545 | 6 | 546 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1asp_A | 0 | 35 | 545 | 6 | 546 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1aso_B | 0 | 35 | 545 | 6 | 546 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
