| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra026039 |
| Family | GT33 |
| Protein Properties | Length: 512 Molecular Weight: 57611 Isoelectric Point: 7.6356 |
| Chromosome | Chromosome/Scaffold: 06 Start: 6387580 End: 6390202 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT33 | 6 | 453 | 0 |
| RACVVVLGDLGRSPRMQYHALSLARQASLQVDIVAYGGSIPHEAVLKHPSIHIHTMAQPRFINLLPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFL VQNPPSVPTLIAVKWASSWRHAAFVVDWHNFGYTLLALSLGRNNLFVSLYRWFEKHYGKMATGSLCVTKAMQHELEQNWGVSARVLYDQPPEFFRAALLE ERDELFCRVKKDLCHPIGVYDIISRELENQEPSETLFTTKRNDEISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSEGSETAEIAEEQRLY PNLLFIITGKGPEKEMYEEKIKRLNLKHVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGQNGLLFSS SSELADQLLILFKGFPRNCDALMSLKAGAMETGSSGRWATEWEDCAKP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 512 Download |
| MGKRGRACVV VLGDLGRSPR MQYHALSLAR QASLQVDIVA YGGSIPHEAV LKHPSIHIHT 60 MAQPRFINLL PKILYPVTLL LKAFIQFTML LWFLFVKVPA PDIFLVQNPP SVPTLIAVKW 120 ASSWRHAAFV VDWHNFGYTL LALSLGRNNL FVSLYRWFEK HYGKMATGSL CVTKAMQHEL 180 EQNWGVSARV LYDQPPEFFR AALLEERDEL FCRVKKDLCH PIGVYDIISR ELENQEPSET 240 LFTTKRNDEI SLKQNRPALV VSSTSWTPDE NFGILLEAAV MYDRRVAARS EGSETAEIAE 300 EQRLYPNLLF IITGKGPEKE MYEEKIKRLN LKHVAFRTMW LSAEDYPLLL GSADLGVCLH 360 TSSSGLDLPM KVVDMFGCGL PVCSVSYSCI QELVKDGQNG LLFSSSSELA DQLLILFKGF 420 PRNCDALMSL KAGAMETGSS GRWATEWEDC AKPLITQAKS ISSLCLYLTH IFFCWTISHK 480 MSDPCRSCLK MRNDERELKT GVLGCSSQLI M* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03794 | GT1_wbuB_like | 2.0e-12 | 14 | 414 | 415 | + This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. | ||
| COG0438 | RfaG | 9.0e-14 | 56 | 418 | 369 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| cd03801 | GT1_YqgM_like | 3.0e-17 | 21 | 416 | 409 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| PLN02275 | PLN02275 | 0 | 1 | 417 | 417 | + transferase, transferring glycosyl groups | ||
| cd03816 | GT1_ALG1_like | 0 | 2 | 455 | 457 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI19390.1 | 0 | 1 | 465 | 9 | 483 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001117297.1 | 0 | 1 | 460 | 1 | 491 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | NP_173105.1 | 0 | 1 | 460 | 1 | 460 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283369.1 | 0 | 1 | 461 | 124 | 596 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002330745.1 | 0 | 1 | 469 | 1 | 479 | predicted protein [Populus trichocarpa] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| dolichyl-diphosphooligosaccharide biosynthesis | 2.4.1.142-RXN | EC-2.4.1.142 | chitobiosyldiphosphodolichol β-mannosyltransferase |
