y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra026178 |
Family | GH1 |
Protein Properties | Length: 487 Molecular Weight: 55255.7 Isoelectric Point: 7.0304 |
Chromosome | Chromosome/Scaffold: 06 Start: 5747764 End: 5752459 |
Description | beta glucosidase 19 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 51 | 470 | 0 |
YQEDIKLMKKLNTDAFRLSIAWPRIFPHGRMEKGISKEGVQFYHDLIDELLKNDITPLVTVFHWDMPADLEDEYGGFLSERVVPDFVEYANFTFHEYGGK VKNWITFNEPWVFSRSGYDTGKKAPGRCSPYIKDFGHLCQDGRSGFEAYVVSHNLLISHAEAVDAFRKCEKCKGGKIGIAHSPAWFEPKDVEGGQRTVDR VLDFIMGWHLDPTTYGDYPQSMKDAVGARLPKFTKAQKAKLKGSADFVGINYYSSFYAKASEKPDYRQPSWATDSLVEFEPKTVDGSVKIGSQPSTAKMA VYAAGLRKLVKYIKDRYGNPEIIITENGYGEDLGEKDTDHSVALNDHNRKYYHQRHLLALHQAICEDKVNVTSYFVWSLMDNFEWQDGYTARFGLYYIDF KNNLTRMEKESAKWFTEFLK |
Full Sequence |
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Protein Sequence Length: 487 Download |
MKIPLLGLLL LLSLVGSPTR AEEGPVCPKT ETLSRASFPE GFMFGTATAS YQEDIKLMKK 60 LNTDAFRLSI AWPRIFPHGR MEKGISKEGV QFYHDLIDEL LKNDITPLVT VFHWDMPADL 120 EDEYGGFLSE RVVPDFVEYA NFTFHEYGGK VKNWITFNEP WVFSRSGYDT GKKAPGRCSP 180 YIKDFGHLCQ DGRSGFEAYV VSHNLLISHA EAVDAFRKCE KCKGGKIGIA HSPAWFEPKD 240 VEGGQRTVDR VLDFIMGWHL DPTTYGDYPQ SMKDAVGARL PKFTKAQKAK LKGSADFVGI 300 NYYSSFYAKA SEKPDYRQPS WATDSLVEFE PKTVDGSVKI GSQPSTAKMA VYAAGLRKLV 360 KYIKDRYGNP EIIITENGYG EDLGEKDTDH SVALNDHNRK YYHQRHLLAL HQAICEDKVN 420 VTSYFVWSLM DNFEWQDGYT ARFGLYYIDF KNNLTRMEKE SAKWFTEFLK PGLKQKSSKS 480 TFSEEL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 2.0e-85 | 30 | 470 | 507 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 2.0e-91 | 34 | 481 | 498 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-98 | 38 | 465 | 479 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 3.0e-111 | 39 | 465 | 474 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-137 | 34 | 470 | 483 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL24252.1 | 0 | 1 | 486 | 1 | 527 | AT3g21370/MHC9_5 [Arabidopsis thaliana] |
EMBL | CAA57913.1 | 0 | 1 | 462 | 1 | 504 | beta-glucosidase [Brassica napus] |
EMBL | CAC19786.1 | 0 | 5 | 471 | 10 | 517 | beta-glucosidase 1 [Arabidopsis thaliana] |
RefSeq | NP_175649.1 | 0 | 5 | 471 | 10 | 517 | BGLU18 (BETA GLUCOSIDASE 18); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_188774.2 | 0 | 1 | 486 | 1 | 527 | BGLU19 (BETA GLUCOSIDASE 19); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 33 | 469 | 29 | 503 | A Chain A, Human Gamma-Glutamyl Cyclotransferase |
PDB | 3ptq_A | 0 | 33 | 469 | 29 | 503 | A Chain A, Human Gamma-Glutamyl Cyclotransferase |
PDB | 3ptm_B | 0 | 33 | 469 | 29 | 503 | A Chain A, Human Gamma-Glutamyl Cyclotransferase |
PDB | 3ptm_A | 0 | 33 | 469 | 29 | 503 | A Chain A, Human Gamma-Glutamyl Cyclotransferase |
PDB | 3ptk_B | 0 | 33 | 469 | 29 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |