| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra026345 |
| Family | GT14 |
| Protein Properties | Length: 163 Molecular Weight: 18144.8 Isoelectric Point: 9.4725 |
| Chromosome | Chromosome/Scaffold: 01 Start: 9896418 End: 9896906 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 1 | 76 | 2e-29 |
| MVLSRSFVEYCIWGWDNLPRTLLMYYTNFLSTPEGYFHTVICNAPEYSSTVVNSDLHYISWDKRPQQHPKMLNISD | |||
| Full Sequence |
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| Protein Sequence Length: 163 Download |
| MVLSRSFVEY CIWGWDNLPR TLLMYYTNFL STPEGYFHTV ICNAPEYSST VVNSDLHYIS 60 WDKRPQQHPK MLNISDTKKM IASGAVFARK FTHNDLALDK IDTELLGRGN GSFTPGGWCA 120 GKPNCSKVGD PSKINPGLGA DRISGLVSRL ISPSKLTRRQ CR* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 9.0e-24 | 1 | 81 | 86 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 3.0e-104 | 1 | 162 | 162 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB43880.1 | 0 | 6 | 162 | 228 | 384 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_194478.3 | 0 | 1 | 162 | 260 | 421 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002317501.1 | 0 | 1 | 162 | 258 | 419 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329084.1 | 0 | 1 | 162 | 258 | 419 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533550.1 | 0 | 1 | 162 | 256 | 417 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV164140 | 163 | 1 | 163 | 0 |
| EV532681 | 163 | 1 | 163 | 0 |
| EX041021 | 165 | 1 | 163 | 0 |
| FY440245 | 166 | 1 | 163 | 0 |
| FY829032 | 163 | 1 | 163 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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