| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra026714 |
| Family | GT33 |
| Protein Properties | Length: 466 Molecular Weight: 52369.7 Isoelectric Point: 7.0648 |
| Chromosome | Chromosome/Scaffold: 09 Start: 33357481 End: 33360031 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT33 | 7 | 454 | 0 |
| RACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLKHPSIHIHTMAQPRFIQLLPKMLYPVTLLLKAFIQFTMLFWFLFVKVPAPDLFL VQNPPSVPTLVAVKWASSWRRAAFVVDWHNFGYTLLALSLGRNNVFVSLYRWIEKYYGKMATGSLCVTKAMQHELEQNWEVRAKVLYDQPPEFFRPALLE ERHELFCRVKKDLCHPSGVYDFISRELENQVLDETLFTTKTNADILLKQNRPALVVSSTSWTPDENFGILLDAAVMYDRRVAARSKGSDTAEISEEQDLY PNLLFIITGKGPEKEMYEEKIKRLNLKHVAFRTMWLAAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGQNGLLFSS SSELADQLLVLFKGFPGNCDALMSLKAGAMETGSSGRWATEWEDCAKP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 466 Download |
| MRGKRGRACV VVLGDLGRSP RMQYHALSLA RQASFQVDIV AYGGSIPHEA VLKHPSIHIH 60 TMAQPRFIQL LPKMLYPVTL LLKAFIQFTM LFWFLFVKVP APDLFLVQNP PSVPTLVAVK 120 WASSWRRAAF VVDWHNFGYT LLALSLGRNN VFVSLYRWIE KYYGKMATGS LCVTKAMQHE 180 LEQNWEVRAK VLYDQPPEFF RPALLEERHE LFCRVKKDLC HPSGVYDFIS RELENQVLDE 240 TLFTTKTNAD ILLKQNRPAL VVSSTSWTPD ENFGILLDAA VMYDRRVAAR SKGSDTAEIS 300 EEQDLYPNLL FIITGKGPEK EMYEEKIKRL NLKHVAFRTM WLAAEDYPLL LGSADLGVCL 360 HTSSSGLDLP MKVVDMFGCG LPVCSVSYSC IQELVKDGQN GLLFSSSSEL ADQLLVLFKG 420 FPGNCDALMS LKAGAMETGS SGRWATEWED CAKPLITQVV SQNED* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03794 | GT1_wbuB_like | 1.0e-12 | 15 | 417 | 419 | + This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. | ||
| cd03798 | GT1_wlbH_like | 1.0e-12 | 23 | 419 | 412 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03801 | GT1_YqgM_like | 7.0e-16 | 22 | 417 | 411 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| PLN02275 | PLN02275 | 0 | 3 | 418 | 416 | + transferase, transferring glycosyl groups | ||
| cd03816 | GT1_ALG1_like | 0 | 3 | 456 | 456 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG10823.1 | 0 | 90 | 465 | 1 | 357 | AC011808_11 Putative glycosyl transferase [Arabidopsis thaliana] |
| EMBL | CBI19390.1 | 0 | 3 | 463 | 10 | 482 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001117297.1 | 0 | 3 | 465 | 2 | 495 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | NP_173105.1 | 0 | 3 | 465 | 2 | 464 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283369.1 | 0 | 3 | 461 | 125 | 595 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| dolichyl-diphosphooligosaccharide biosynthesis | 2.4.1.142-RXN | EC-2.4.1.142 | chitobiosyldiphosphodolichol β-mannosyltransferase |
