| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra027260 |
| Family | GT14 |
| Protein Properties | Length: 426 Molecular Weight: 48258.6 Isoelectric Point: 9.3334 |
| Chromosome | Chromosome/Scaffold: 05 Start: 19974767 End: 19976254 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 83 | 337 | 0 |
| FAYLVSGSKGDVEKLWRTLRAVYHPRNQYVVHLDLESPVDERLQLASRINKDPMYAKTGNVYMITKANLVTYRGPTMVANTLHACAVLLKRSANWDWFIN LSASDYPLVTQDDLLHTFSTLDRNLNFIEHTSDLGWKEEKRAMPVMIDPGLYMLNKSDIYWVTPRRSLPTAFKLFTGSAWMALSRPFVEYCIWGWDNLPR TLLMYYTNFVSSPEGYFQTVICNVPEFSKTPLNHDLHYISWDTPPQQHPHVLSLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 426 Download |
| MGYVVNVEKR WVFPLVITSL VCVFLLATSF NMGLVSSLRK INGIFSIIPS PLSRNQTTKL 60 DFAESKVAKQ QTLPPHEDKL PRFAYLVSGS KGDVEKLWRT LRAVYHPRNQ YVVHLDLESP 120 VDERLQLASR INKDPMYAKT GNVYMITKAN LVTYRGPTMV ANTLHACAVL LKRSANWDWF 180 INLSASDYPL VTQDDLLHTF STLDRNLNFI EHTSDLGWKE EKRAMPVMID PGLYMLNKSD 240 IYWVTPRRSL PTAFKLFTGS AWMALSRPFV EYCIWGWDNL PRTLLMYYTN FVSSPEGYFQ 300 TVICNVPEFS KTPLNHDLHY ISWDTPPQQH PHVLSLNDTS QMISSGAAFA RKFKRDDQVL 360 DMIDKELLRR KNGDGFTPGG WCSGKPKCSQ VGDVANIKPG AGAQRLQGLV DRLVNEAKTG 420 VNQCK* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 2.0e-88 | 83 | 343 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 1 | 425 | 425 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF87858.1 | 0 | 7 | 424 | 1 | 405 | AC022520_2 Hypothetical protein [Arabidopsis thaliana] |
| GenBank | AAK83637.1 | 0 | 1 | 425 | 1 | 424 | AT3g15350/K7L4_15 [Arabidopsis thaliana] |
| RefSeq | NP_566506.1 | 0 | 1 | 425 | 1 | 424 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002329084.1 | 0 | 5 | 425 | 4 | 419 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533550.1 | 0 | 5 | 425 | 4 | 417 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000000000007 | 94 | 371 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000000000007 | 94 | 371 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000000000007 | 94 | 371 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000000000007 | 94 | 371 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.000000000002 | 94 | 371 | 96 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
