| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra027328 |
| Family | GT48 |
| Protein Properties | Length: 1961 Molecular Weight: 227597 Isoelectric Point: 8.5748 |
| Chromosome | Chromosome/Scaffold: 05 Start: 20333777 End: 20349184 |
| Description | glucan synthase-like 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT48 | 1092 | 1822 | 0 |
| IPENLDARRRISFFATSLFMDMPDAPKVRNMMSFSVLTPHYQEDINFSTKELHSAKSSVSIIFYMQKIFPDEWKNFLERMGCENLEALKREGKEEELRKW ASFRGQTLSRTVRGMMYCREALKLQAFLDMADDEDILEGYDDVERSNRPLAAQLDALADMKFTYVVSCQMFGAQKSAGDPHAQDILDLMIKYPSLRVAYV EEREEIVSDNPEKVYYSILVKAVNGFDQEIYRVKLPGPPNIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEAFKMRNLLQEFLRNRGRRPPTILGLR EHIFTGSVSSLAWFMSYQETSFVTIGQRLLANPLRVRFHYGHPDVFDRIFHITRGGISKASRTINLSEDVFAGYNTTLRRGCITYNEYLQVGKGRDVGLN QISKFEAKVANGNSEQTISRDIYRLGQRFDFFRMLSCYFTTIGFYFSSLISVIGIYIYLYGQLYLVLSGLQKTLILEAKVKNIKSLETALASQSFLQLGL LTGLPMVMEIGLEKGFLIAFQDFILMQLQLAAFFFTFSLGTKTHYFGRTILHGGAKYRPTGRKVVVFHANFSENYRLYSRSHFIKGFELIILLVVYELFK HTSQSNMAYSFITFSVWFMSLTWLCAPFLFNPSGFTWEIIVGDWRDWNRWIKEQGGIGIQQDKSWQSWWNDEQAHLRGSGVGARCLEIVLSLRFFLYQYG LVYHLDITQSSTNIIVYALSWVVILATFLTV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1961 Download |
| MSHEIVPVDP IDIPSTSYSR PAQGREDSPE REHQYTRSLT FREHVSEPFD SERLPATLAS 60 EIQRFLRIAN LVESEEPRIA YLCRFHAFEI AHHMDRNSTG RGDEEFTVIR RKEKSDVREL 120 KRVYHAYKEY IIKHGATFNL DHSQREKLVN ARRIASVLYE VLKTVTSGAG PQAIADRESI 180 RAKSEFYVPY NILPLDRGGV HQAIMHLPEI KAAVAIVRNT RGLPPPEDFQ RHQPFVDLFE 240 FLQYAFGFQS GNVANQREHM ILLLSNTIIR QPQKQSSQPK SGDEAVDALM KKFFKNYTSW 300 CKFLGRKNNI RLPCVKKEAL QYKTLYIGLY LLIWGEASNL RFMPECLCYI FHQMAYELHG 360 VLAGDVSMIT GEKVVPAYRG VSHETFLEKV VTPIYKVIEK EAEKNKNGTA DHSMWRNYDD 420 LNEFFWSIEC FELGWPMRSE HDFFCVEPLD TSKPRRWREK LRFRRQTKKT DEEMEDDEEL 480 GPITEEQIKP TQRWLGKTNF VEIRSFWQIF RSFDRMWSFF VLSLQALIIM ACHDVGSPLQ 540 IFNANIFEDV MSIFITSAFL KLIKGILDII FKWKTRTTMP INEKKKQMAR LGLAAMWTVI 600 LPVLYSHSRR KYICYFTSYK TRLGEWCFSP YMVAVTIYLT GSAVELVLFF VPAISKYIET 660 SNHRVFKTLY WWGQPRLFIG RGVQETQISQ FKYTFFWILV LLTKFAFSYA FEIKPLIEPT 720 RLIMKVGVRN YEWHEIFPEV KSNAAAIVAV WAPIMVVYFM DTQIWYSVFC TIFGGLYGVL 780 HHLGEIRTLG MLRGRFHTLP SAFNASLIPH SMKDERKRKE RGFFPFNFCR GSDGQKNSMA 840 KFVLVWNQVI NSFRIEDLIS NKELDLMTMP MSSEVLSGII RWPIFLLANK FSTALSIAKD 900 FKEKDEALYR RIRRDEYMYY AVKECYESLK YILQILVVGD LEKKIISGII NEIEESIRQS 960 SLLEEFKLKE LPTLHKKCIE LVQLLVEGSE DKLPVEKIEE QHSKLVKALQ DIFELVTNDM 1020 MVHGDRILDL LEPLEDSEED TGIFMRVIEP QLFESYGERR CIHFPLPDST SLSEQIQRFL 1080 LLLTVKDSAM DIPENLDARR RISFFATSLF MDMPDAPKVR NMMSFSVLTP HYQEDINFST 1140 KELHSAKSSV SIIFYMQKIF PDEWKNFLER MGCENLEALK REGKEEELRK WASFRGQTLS 1200 RTVRGMMYCR EALKLQAFLD MADDEDILEG YDDVERSNRP LAAQLDALAD MKFTYVVSCQ 1260 MFGAQKSAGD PHAQDILDLM IKYPSLRVAY VEEREEIVSD NPEKVYYSIL VKAVNGFDQE 1320 IYRVKLPGPP NIGEGKPENQ NHAIIFTRGE ALQTIDMNQD NYLEEAFKMR NLLQEFLRNR 1380 GRRPPTILGL REHIFTGSVS SLAWFMSYQE TSFVTIGQRL LANPLRVRFH YGHPDVFDRI 1440 FHITRGGISK ASRTINLSED VFAGYNTTLR RGCITYNEYL QVGKGRDVGL NQISKFEAKV 1500 ANGNSEQTIS RDIYRLGQRF DFFRMLSCYF TTIGFYFSSL ISVIGIYIYL YGQLYLVLSG 1560 LQKTLILEAK VKNIKSLETA LASQSFLQLG LLTGLPMVME IGLEKGFLIA FQDFILMQLQ 1620 LAAFFFTFSL GTKTHYFGRT ILHGGAKYRP TGRKVVVFHA NFSENYRLYS RSHFIKGFEL 1680 IILLVVYELF KHTSQSNMAY SFITFSVWFM SLTWLCAPFL FNPSGFTWEI IVGDWRDWNR 1740 WIKEQGGIGI QQDKSWQSWW NDEQAHLRGS GVGARCLEIV LSLRFFLYQY GLVYHLDITQ 1800 SSTNIIVYAL SWVVILATFL TVKAVDLGRQ LFSTRKHLVY RFFKVFVFVS ILTVIITLSN 1860 ICHLSIKDLI VSCLAFLPTG WGLILIAQAV RPKIEGTSLW EFTQVLARAY DYGMGVVLFA 1920 PMAILAWLPI ISAFQTRFLF NEAFNRRLQI QPILAGKKKK * 1980 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam14288 | FKS1_dom1 | 1.0e-54 | 321 | 438 | 119 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1092 | 1819 | 813 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB02389.1 | 0 | 1 | 1960 | 1 | 1971 | glucan synthase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_188075.1 | 0 | 1 | 1960 | 1 | 1972 | ATGSL04 (glucan synthase-like 4); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Swiss-Prot | Q9LUD7 | 0 | 1 | 1960 | 1 | 1975 | CALS8_ARATH RecName: Full=Putative callose synthase 8; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 4 |
| RefSeq | XP_002267956.1 | 0 | 47 | 1960 | 32 | 1925 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002317363.1 | 0 | 47 | 1960 | 40 | 1960 | predicted protein [Populus trichocarpa] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
