| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra027356 |
| Family | CE16 |
| Protein Properties | Length: 375 Molecular Weight: 41575.3 Isoelectric Point: 7.6855 |
| Chromosome | Chromosome/Scaffold: 05 Start: 20495898 End: 20497781 |
| Description | GDSL lipase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 37 | 352 | 8.2e-26 |
| LFVFGDSVFDVGNNNYINTHRAAQANVWPYGQTTFKFPTGRNSDGRLIPDFIAEYAWLPLIPPYLQPGNGVNQFTYGVNFASAGAGALVETYQPQNLIPL GSQLNNFKNVEKMLKDKLGDAETKRIISRAVYLIQIGPNDYFYPFSVNASHFESNSKDKFVDYVIGNTTTVIEGIYKLGGRKFGLMNMGRLDCVPGLLTM DPNRIGSCFEPITELIKLHNVRIPNVLRGLQRRLPGFKYSLFDSYTAGTEAMENPTKYGFKEVKKACCGSGPFRGSSTCGYRAGTSRDFELCENVSDYMF FDGSHTSEKANQQTAE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 375 Download |
| MANNGQLCSI LLLFSTIFSS INLISCEKSL ITNQAALFVF GDSVFDVGNN NYINTHRAAQ 60 ANVWPYGQTT FKFPTGRNSD GRLIPDFIAE YAWLPLIPPY LQPGNGVNQF TYGVNFASAG 120 AGALVETYQP QNLIPLGSQL NNFKNVEKML KDKLGDAETK RIISRAVYLI QIGPNDYFYP 180 FSVNASHFES NSKDKFVDYV IGNTTTVIEG IYKLGGRKFG LMNMGRLDCV PGLLTMDPNR 240 IGSCFEPITE LIKLHNVRIP NVLRGLQRRL PGFKYSLFDS YTAGTEAMEN PTKYGFKEVK 300 KACCGSGPFR GSSTCGYRAG TSRDFELCEN VSDYMFFDGS HTSEKANQQT AELMWDGPSD 360 LVGPYTLKTL FQNF* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3240 | COG3240 | 7.0e-5 | 37 | 374 | 353 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
| pfam00657 | Lipase_GDSL | 5.0e-7 | 78 | 354 | 285 | + GDSL-like Lipase/Acylhydrolase. | ||
| cd01846 | fatty_acyltransferase_like | 1.0e-30 | 37 | 354 | 320 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| PLN03156 | PLN03156 | 1.0e-54 | 36 | 374 | 348 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 4.0e-122 | 36 | 358 | 323 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD25771.1 | 0 | 29 | 372 | 28 | 393 | AC006577_7 Belongs to the PF |
| GenBank | AAM47031.1 | 0 | 6 | 372 | 5 | 369 | lipase SIL1 [Brassica rapa subsp. pekinensis] |
| RefSeq | NP_175801.1 | 0 | 29 | 372 | 28 | 363 | GLIP3; carboxylesterase/ lipase [Arabidopsis thaliana] |
| RefSeq | NP_198915.1 | 0 | 4 | 372 | 3 | 372 | GLIP1 (GDSL LIPASE1); carboxylesterase/ lipase [Arabidopsis thaliana] |
| Swiss-Prot | Q9SYF0 | 0 | 1 | 372 | 1 | 374 | GLIP2_ARATH RecName: Full=GDSL esterase/lipase 2; AltName: Full=Extracellular lipase 2; Flags: Precursor |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| sinapate ester biosynthesis | SINAPINE-ESTERASE-RXN | EC-3.1.1.49 | sinapine esterase |
