| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra027918 |
| Family | CE16 |
| Protein Properties | Length: 234 Molecular Weight: 26189.3 Isoelectric Point: 9.0068 |
| Chromosome | Chromosome/Scaffold: 09 Start: 9844589 End: 9845446 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 26 | 215 | 2.6e-22 |
| RNALYMIDIGQNDIARSFSIGNSYSQTVKLIPQFISEIKTSIKRLYDEGGRRFWIHNTGPLGCLPQKLSMAQSKDLDQHGCLASYNAAAKLFNQMLDHMC ERLRIELRDATIIYIDIYAIKYSLIANSKAYGFERPLMACCGYGGSPYNYNAKITCAHRGANVCDKGSRFVSWDGIHYTETANAIVAMKV | |||
| Full Sequence |
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| Protein Sequence Length: 234 Download |
| MILTGVSMVG FLDPSKGMFI SESGFRNALY MIDIGQNDIA RSFSIGNSYS QTVKLIPQFI 60 SEIKTSIKRL YDEGGRRFWI HNTGPLGCLP QKLSMAQSKD LDQHGCLASY NAAAKLFNQM 120 LDHMCERLRI ELRDATIIYI DIYAIKYSLI ANSKAYGFER PLMACCGYGG SPYNYNAKIT 180 CAHRGANVCD KGSRFVSWDG IHYTETANAI VAMKVLSMQY SKPKAPFDFF CRR* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd01847 | Triacylglycerol_lipase_like | 3.0e-6 | 26 | 218 | 197 | + Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions. | ||
| cd01846 | fatty_acyltransferase_like | 6.0e-11 | 27 | 218 | 196 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| pfam00657 | Lipase_GDSL | 5.0e-19 | 20 | 215 | 204 | + GDSL-like Lipase/Acylhydrolase. | ||
| PLN03156 | PLN03156 | 3.0e-22 | 25 | 216 | 195 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 8.0e-65 | 25 | 217 | 194 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC23651.1 | 0 | 16 | 204 | 112 | 300 | lipase homolog [Arabidopsis thaliana] |
| RefSeq | NP_172410.1 | 0 | 13 | 231 | 150 | 368 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
| RefSeq | NP_176059.1 | 0 | 16 | 233 | 156 | 373 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002277053.1 | 0 | 19 | 233 | 167 | 383 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512551.1 | 0 | 12 | 232 | 145 | 365 | zinc finger protein, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EW738665 | 208 | 27 | 234 | 0 |
| DK534907 | 202 | 33 | 234 | 0 |
| FD566839 | 184 | 51 | 234 | 0 |
| DK524174 | 214 | 21 | 234 | 0 |
| EX907090 | 210 | 25 | 234 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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