| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra028034 |
| Family | GT66 |
| Protein Properties | Length: 726 Molecular Weight: 81903.4 Isoelectric Point: 9.2187 |
| Chromosome | Chromosome/Scaffold: 09 Start: 19199504 End: 19202553 |
| Description | staurosporin and temperature sensitive 3-like b |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT66 | 31 | 674 | 0 |
| LRVSILGLVYVLAFIARLFSVLRYESMIHEFDPYFNYRTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAALIYWTLRFLRFFVHIREVCV LTAPFFASNTTLVAYFFGKEIWDTGAGLVAAALIAICPGYISRSVAGSYDNEAVAIFALLLTFYLFVKAVKTGSLSWALGSAFGYFYMVSAWGGYVFIIN LVPLYVLVLLITGRYSMRLYVAYNCMYILGMLLAMQIRFVGFQHVQSGEHMAAMGVFLLMQVFYFLDWVKHQLNDTKLFQTFLRITVTSAILVGGIALGV GTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDYHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSLYFAGVMVRLILVATPAVCL ISAIAVSATVKNLTSLLRTKQKVPQTGSTKGVGSSKSSSKVTLDQSQPFHKNGAIALLVGVFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGNRIIFD DYREAYYWLRQNTPTDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMRSLDVNYVLVVFGGVTGYSSDDINKFLWMVRIG GGVYPVIKEPDYLVNGEFRVDKGASPKMLNCLMYKLCYYRFGEL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 726 Download |
| MAAKKASPDL LNSSFSFKSL KLKTKQQELL LRVSILGLVY VLAFIARLFS VLRYESMIHE 60 FDPYFNYRTT LFLTEKGFYE FWNWFDSESW YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR 120 FFVHIREVCV LTAPFFASNT TLVAYFFGKE IWDTGAGLVA AALIAICPGY ISRSVAGSYD 180 NEAVAIFALL LTFYLFVKAV KTGSLSWALG SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL 240 ITGRYSMRLY VAYNCMYILG MLLAMQIRFV GFQHVQSGEH MAAMGVFLLM QVFYFLDWVK 300 HQLNDTKLFQ TFLRITVTSA ILVGGIALGV GTASGYISPW TGRFYSLLDP TYAKDHIPII 360 ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY FCFKRLSDAT IFIVMYGLTS LYFAGVMVRL 420 ILVATPAVCL ISAIAVSATV KNLTSLLRTK QKVPQTGSTK GVGSSKSSSK VTLDQSQPFH 480 KNGAIALLVG VFYLLSRYAI HCTWVTSEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR 540 QNTPTDAKVM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE DEAYDIMRSL 600 DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVYPVIKEP DYLVNGEFRV DKGASPKMLN 660 CLMYKLCYYR FGELVTEYGK PTGYDRARGV EIGNKDIKLE HLEEAYTTSN WIVRVYRVKP 720 PTNML* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR04154 | archaeo_STT3 | 4.0e-25 | 33 | 607 | 640 | + oligosaccharyl transferase, archaeosortase A system-associated. Members of this protein family occur, one to three members per genome, in the same species of Euryarchaeota as contain the predicted protein-sorting enzyme archaeosortase (TIGR04125) and its cognate protein-sorting signal PGF-CTERM (TIGR04126). | ||
| COG1287 | COG1287 | 1.0e-66 | 32 | 723 | 728 | + Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] | ||
| pfam02516 | STT3 | 6.0e-143 | 32 | 676 | 662 | + Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004576 | oligosaccharyl transferase activity |
| GO:0006486 | protein glycosylation |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_174675.2 | 0 | 1 | 725 | 13 | 735 | STT3B (staurosporin and temperature sensitive 3-like b); oligosaccharyl transferase [Arabidopsis thaliana] |
| RefSeq | XP_002269119.1 | 0 | 8 | 723 | 25 | 735 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318345.1 | 0 | 26 | 723 | 22 | 719 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329687.1 | 0 | 11 | 723 | 24 | 719 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514508.1 | 0 | 9 | 663 | 16 | 669 | oligosaccharyl transferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lgz_A | 0 | 501 | 719 | 20 | 238 | A Chain A, Solution Structure Of Stt3p |
| PDB | 3vu0_C | 0.00003 | 531 | 647 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_B | 0.00003 | 531 | 647 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vu0_A | 0.00003 | 531 | 647 | 6 | 123 | A Chain A, Crystal Structure Of The C-terminal Globular Domain Of Oligosaccharyltransferase (afaglb-s2, Af_0040, O30195_arcfu) From Archaeoglobus Fulgidus |
| PDB | 3vgp_A | 0.0005 | 530 | 631 | 6 | 113 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
