y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra028143 |
Family | CE16 |
Protein Properties | Length: 492 Molecular Weight: 54236 Isoelectric Point: 9.4568 |
Chromosome | Chromosome/Scaffold: 04 Start: 6083453 End: 6091564 |
Description | SGNH hydrolase-type esterase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE16 | 280 | 469 | 1.8e-24 |
RAANKHVNDAMYFIGLGSNDYVNNFLQPFMADGQQYTHDEFVELLTSTLDNQLTTIYKLGARKVIFHGLGPLGCIPSQRVKSKTGMCLKRVNEWVMEFNT RTKKLLEDLNKRLPGAKFAFADTYPAVLDLIDNPTRYGFKVANTSCCNVDTSVGGLCLPNSKMCKNRKDFVFWDAFHPSDSANQILADQL |
Full Sequence |
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Protein Sequence Length: 492 Download |
MAIRVLYSTT PPTSTRGAAP PTDSSSPRLR PPSELLSIFF PPPLELLSFL ELPLELSISS 60 SEASCTVQQQ QQQHLLKLTP MKHHVLHTRG PDRNVLCSKR GGFGQRSKYR GSRRGSPPRT 120 AGGRDRSGAG QCGAGGTKCH LYLKHSKNDI SILGSYWVVD SSLFCQKLTL HGKILAGNKT 180 KKNQNFSEIL EKVEGEGHLF PWRTIYIMYY SMYIHVVKLA HGIRNGAASV DGVDAKLRQV 240 VPETIQEDVI FKMSAPPKSD APLITSNDLA EADGAKIGDR AANKHVNDAM YFIGLGSNDY 300 VNNFLQPFMA DGQQYTHDEF VELLTSTLDN QLTTIYKLGA RKVIFHGLGP LGCIPSQRVK 360 SKTGMCLKRV NEWVMEFNTR TKKLLEDLNK RLPGAKFAFA DTYPAVLDLI DNPTRYGFKV 420 ANTSCCNVDT SVGGLCLPNS KMCKNRKDFV FWDAFHPSDS ANQILADQLF SSLISSSSHS 480 HSPAPAPKNN Y* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK03767 | PRK03767 | 3.0e-13 | 205 | 278 | 74 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
pfam00657 | Lipase_GDSL | 9.0e-17 | 265 | 469 | 211 | + GDSL-like Lipase/Acylhydrolase. | ||
cd01846 | fatty_acyltransferase_like | 6.0e-27 | 287 | 470 | 184 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
PLN03156 | PLN03156 | 2.0e-44 | 275 | 470 | 200 | + GDSL esterase/lipase; Provisional | ||
cd01837 | SGNH_plant_lipase_like | 4.0e-74 | 275 | 470 | 200 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. |
Gene Ontology | |
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GO Term | Description |
GO:0006629 | lipid metabolic process |
GO:0016788 | hydrolase activity, acting on ester bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM61634.1 | 0 | 271 | 485 | 140 | 354 | GDSL-motif lipase/hydrolase-like protein [Arabidopsis thaliana] |
GenBank | ABN08073.1 | 0 | 275 | 474 | 142 | 341 | Lipolytic enzyme, G-D-S-L [Medicago truncatula] |
RefSeq | NP_198585.2 | 0 | 271 | 485 | 140 | 354 | GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] |
RefSeq | XP_002302944.1 | 0 | 271 | 487 | 140 | 357 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531921.1 | 0 | 271 | 489 | 145 | 368 | zinc finger protein, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dy4_C | 0.00002 | 205 | 278 | 3 | 74 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 4dy4_A | 0.00002 | 205 | 278 | 3 | 74 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_B | 0.00002 | 205 | 278 | 4 | 75 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_A | 0.00002 | 205 | 278 | 4 | 75 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6k_B | 0.00002 | 205 | 278 | 4 | 75 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CA992867 | 198 | 271 | 468 | 0 |
AW348454 | 200 | 271 | 470 | 0 |
CX637926 | 214 | 275 | 488 | 0 |
BQ514487 | 200 | 271 | 470 | 0 |
GH168106 | 200 | 271 | 470 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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