| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra028330 |
| Family | GH31 |
| Protein Properties | Length: 899 Molecular Weight: 99964.1 Isoelectric Point: 4.9351 |
| Chromosome | Chromosome/Scaffold: 01 Start: 18460091 End: 18467027 |
| Description | heteroglycan glucosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH31 | 216 | 500 | 0 |
| AEERFPDPSALANYLHNNGFKAVWMLDPGIKKEEGYSVYDSGSKDDVWVKQADGKPFIGISLWCYVFHDILSCILMYMQQIPEILCLVSLGEVWPGPCVF PDYTNSKTRSWWASLVKDFISNGVDGIWNDMNEPAVFNTVTKTMPENNIHCGEDDLGGVQNHSHYHNVYGTLMARSTYEGIKLADKNKRPFVLTRAGFIG SQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPLSGPDIGGFGGNATPRLFGRWMGVGAMFPFCRGHSEVATDDHEPWSFGGE | |||
| Full Sequence |
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| Protein Sequence Length: 899 Download |
| MTVSGDNSET IGIAPTEMIF ESILEDGVFR FDCSVEHRKA AFPSVSFKNI KDREVPVISH 60 NVPAYTPTCV CLEEKQVVTF EFPPGTSFYG TGEVGGELER TGKRVFTWNT DAWGYGPGTT 120 PLYQSHPWVL VVLPTGETLG VLADTTQKCE IDLRKEGIIR IIAPTSYPII TFGPFSSPTA 180 VLESLSHAIG TVFMPPKWAL GYHQCRFSYM SEKRVAEERF PDPSALANYL HNNGFKAVWM 240 LDPGIKKEEG YSVYDSGSKD DVWVKQADGK PFIGISLWCY VFHDILSCIL MYMQQIPEIL 300 CLVSLGEVWP GPCVFPDYTN SKTRSWWASL VKDFISNGVD GIWNDMNEPA VFNTVTKTMP 360 ENNIHCGEDD LGGVQNHSHY HNVYGTLMAR STYEGIKLAD KNKRPFVLTR AGFIGSQRYA 420 ATWTGDNLST WEHLHMSISM VLQLGLSGQP LSGPDIGGFG GNATPRLFGR WMGVGAMFPF 480 CRGHSEVATD DHEPWSFGGE DLPTLYLRGG SIISVAPPHL HVGEFTLSDD LTLLVSLDEN 540 GKAEGLLFED DGDGYGYTKG KFLITNYIAE KHSSIVTVKV SKTEGDWQRP KRRVHVRLLL 600 GGGAMLDAWG MDGETIKINV PSEHEVSELI TKSNESFKLH MENTKLIPEK EMLPGQKGME 660 LSRVPIELNN GNWKLNIIPW IGGRILSMSH VPSGVQWLHS RIDINGYEEY SSTEYRSSGC 720 TEEYNIIETD LEHASEEESL ILEGDVGGGL VLQRKINIPS DNPNILRIAS TIEARSVGAG 780 SGGYSRLACL RVHPTFTLFH PTESFVSFTS IDGLKHEVWP DSGEQIYEGN NLPHGKWMLV 840 DKSLNLQLVN MFDVSQVVKC IVNWDSGTVN LELWSEDRPV SKETPLEIEH EYEVTSFP* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06603 | GH31_GANC_GANAB_alpha | 4.0e-90 | 190 | 500 | 347 | + This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae. | ||
| pfam01055 | Glyco_hydro_31 | 7.0e-101 | 170 | 500 | 365 | + Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. | ||
| cd06604 | GH31_glucosidase_II_MalA | 3.0e-145 | 190 | 500 | 344 | + Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source. | ||
| PLN02763 | PLN02763 | 0 | 16 | 500 | 517 | + hydrolase, hydrolyzing O-glycosyl compounds | ||
| PLN02763 | PLN02763 | 0 | 490 | 897 | 408 | + hydrolase, hydrolyzing O-glycosyl compounds | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB02784.1 | 0 | 13 | 500 | 1 | 488 | alpha glucosidase-like protein [Arabidopsis thaliana] |
| DDBJ | BAB02784.1 | 0 | 501 | 898 | 562 | 959 | alpha glucosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_566736.1 | 0 | 1 | 500 | 1 | 500 | HGL1 (heteroglycan glucosidase 1); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_566736.1 | 0 | 501 | 898 | 594 | 991 | HGL1 (heteroglycan glucosidase 1); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002263148.1 | 0 | 18 | 500 | 1 | 482 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2g3n_F | 0 | 90 | 494 | 66 | 490 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2g3n_E | 0 | 90 | 494 | 66 | 490 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2g3n_D | 0 | 90 | 494 | 66 | 490 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2g3n_C | 0 | 90 | 494 | 66 | 490 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2g3n_B | 0 | 90 | 494 | 66 | 490 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-2141 | EC-3.2.1.20 | α-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES911816 | 268 | 233 | 500 | 0 |
| HO779383 | 394 | 501 | 894 | 0 |
| ES901722 | 260 | 241 | 500 | 0 |
| EX682446 | 250 | 17 | 266 | 0 |
| HO779383 | 163 | 345 | 500 | 1.96182e-44 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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