| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra028365 |
| Family | GT14 |
| Protein Properties | Length: 421 Molecular Weight: 46939.4 Isoelectric Point: 7.8984 |
| Chromosome | Chromosome/Scaffold: 01 Start: 18146972 End: 18149249 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 72 | 326 | 0 |
| VAYLISGSSGDSRRILRLLFAAYHPRNRYLLHLDSLATQSERDRLALTVGDVPIFRAARNVDVVGKPDFAYRRGSSPMASTLHGASILLRLSGAWDWFVD LSVDEYPLVTQDELLHILSYLPKDLNFVNHTSYIGWKESRRLKPVIVDPGLYLVEKTDMFFASQKRELPKAFKLFSGPSFSILSRSFIEHCVLGTDNFPR TLLMYLSNTPASLSNYFPTILCNSNLFKKTIINNNLLYQASNDTSKERRHQLDSK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 421 Download |
| MQNGAHGVAK EQPRLTLYII LTTAFLSLCF LLSLSSSFHS SPPYSGSNGI RPDPRLFPSS 60 SKIAADTSPP SVAYLISGSS GDSRRILRLL FAAYHPRNRY LLHLDSLATQ SERDRLALTV 120 GDVPIFRAAR NVDVVGKPDF AYRRGSSPMA STLHGASILL RLSGAWDWFV DLSVDEYPLV 180 TQDELLHILS YLPKDLNFVN HTSYIGWKES RRLKPVIVDP GLYLVEKTDM FFASQKRELP 240 KAFKLFSGPS FSILSRSFIE HCVLGTDNFP RTLLMYLSNT PASLSNYFPT ILCNSNLFKK 300 TIINNNLLYQ ASNDTSKERR HQLDSKEFTE MVESGAAFAR VSTFDDAVLD RIDHELLGRA 360 HGEVVPGGWC LGDSGDNRSL CSVWGDSGIL RPGSGSERLE RRIVELLSND WFRLHQCIAE 420 * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 1.0e-63 | 72 | 332 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 6.0e-115 | 54 | 417 | 364 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS99698.1 | 0 | 11 | 420 | 6 | 417 | At3g24040 [Arabidopsis thaliana] |
| DDBJ | BAD43851.1 | 0 | 149 | 420 | 1 | 272 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_189046.1 | 0 | 11 | 420 | 6 | 417 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002282998.1 | 0 | 40 | 420 | 46 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299292.1 | 0 | 17 | 420 | 24 | 428 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0003 | 88 | 273 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0003 | 88 | 273 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0003 | 88 | 273 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0003 | 88 | 273 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0008 | 88 | 273 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
