y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra028449 |
Family | GT14 |
Protein Properties | Length: 372 Molecular Weight: 42244.1 Isoelectric Point: 8.8936 |
Chromosome | Chromosome/Scaffold: 02 Start: 393893 End: 395714 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 201 | 280 | 2.6e-33 |
GSAWMALSRPFIDYCIWGWDNLPRTVLMYYSNFLSSPEGYFHTVLCNAEEFRNTTVNSDLHFITWDNPPKQHPHHLTLAD | |||
GT14 | 89 | 200 | 6.7e-40 |
FAYLISGSAGDGKSLRRTLLALYHPNNRYVVHLERASSPEEREDLHGYIRNSSLFRRFQNVHVIEKANLVTYRGPTMVANTLHAAAILLREGAEWDWFIN LSSSDYPLMTQD |
Full Sequence |
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Protein Sequence Length: 372 Download |
MKKLRSYYSN ARHHHNHHHS ERRWILFPIV IASIFAVFLL FLTTLTSPTG ARLLPFTRPV 60 LLTGSGSSAF VESKIKPRPV SSLPDPPRFA YLISGSAGDG KSLRRTLLAL YHPNNRYVVH 120 LERASSPEER EDLHGYIRNS SLFRRFQNVH VIEKANLVTY RGPTMVANTL HAAAILLREG 180 AEWDWFINLS SSDYPLMTQD GSAWMALSRP FIDYCIWGWD NLPRTVLMYY SNFLSSPEGY 240 FHTVLCNAEE FRNTTVNSDL HFITWDNPPK QHPHHLTLAD MDRMVNSNAP FARKFRREDP 300 VLDKIDEELL NRGFGMPTPG GWCIGSHENG TDPCAVIGDT DVIRPGPGAR RLESLVTSLL 360 STENFRPKQC K* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03183 | PLN03183 | 2.0e-56 | 20 | 200 | 187 | + acetylglucosaminyltransferase family protein; Provisional | ||
pfam02485 | Branch | 1.0e-56 | 89 | 285 | 250 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 3.0e-83 | 201 | 371 | 171 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ21364.1 | 0 | 88 | 371 | 75 | 401 | hypothetical protein OsJ_37021 [Oryza sativa Japonica Group] |
RefSeq | NP_198815.1 | 0 | 1 | 371 | 1 | 447 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002282083.1 | 0 | 1 | 371 | 1 | 428 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305329.1 | 0 | 1 | 371 | 1 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324028.1 | 0 | 1 | 371 | 1 | 428 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000003 | 103 | 198 | 99 | 188 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000003 | 103 | 198 | 99 | 188 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000003 | 103 | 198 | 99 | 188 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000003 | 103 | 198 | 99 | 188 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000007 | 103 | 198 | 99 | 188 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |