| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra028472 |
| Family | GT92 |
| Protein Properties | Length: 665 Molecular Weight: 75539.9 Isoelectric Point: 8.242 |
| Chromosome | Chromosome/Scaffold: 02 Start: 537701 End: 540610 |
| Description | Domain of unknown function (DUF23) |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT92 | 370 | 588 | 7.7e-25 |
| QFETCVCTMTRNAANVLREWVMYHAGIGVSRWFIYDNNSDDDIVSEVENLKNCGYNVSRHFWPWIKTQEAGFANCAIRAKRDCEWVAFIDVDEFFYIPSG QTLTQVIKKYTTPLSSSASMIGEIRTSCHSFGPSGLKDPPRRGVMASYTCRMSQPERHKSIVRPETLNTTLINVVHHFQLKEGFTFVDVEKDAMIINHYK YQVWDIFKEKFKRRVATYV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 665 Download |
| MEVQETKTLK QYSNKQKILL VGEGDFSFSL SLGRAFGSAS NITTSSLDSR VDVNRKYTYG 60 KQNVEELERL GGTVIHGVNV HSMSSDNRLA RYNRIVFNFP HSGLGFGSEH ESFYIMQHQA 120 LVRGFFESAR KMLEDEDGEI HLTHKTTRPF SEWEIETLAQ EKGLRLIGLM VFDQLAFPGY 180 SNKKGSGNDL FCVFAHTNDS SKVYKELPFA VETSYSGRQI VRCSAVPRHQ SVSLAVKGWT 240 VDNRFLVGAT YQWDRLVYDA VIDHDNTTVA FVKGLNLRPG KVADVSRYEC VYGWDLAKPK 300 LLLRSQVISA AQEIVRCKTP LTVLTGPRVA QSPAVKVSVR IKGSGMLPSV AHPINHPVRV 360 KDLTYGEGKQ FETCVCTMTR NAANVLREWV MYHAGIGVSR WFIYDNNSDD DIVSEVENLK 420 NCGYNVSRHF WPWIKTQEAG FANCAIRAKR DCEWVAFIDV DEFFYIPSGQ TLTQVIKKYT 480 TPLSSSASMI GEIRTSCHSF GPSGLKDPPR RGVMASYTCR MSQPERHKSI VRPETLNTTL 540 INVVHHFQLK EGFTFVDVEK DAMIINHYKY QVWDIFKEKF KRRVATYVAD WQDKENVGSK 600 DRTPGLGTRP VEPSDWAERF CEVRDNGLKD WVLENFVDRK TQRLVWEEER NIMVGEVVAQ 660 MDLC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13704 | Glyco_tranf_2_4 | 2.0e-13 | 380 | 469 | 91 | + Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases, | ||
| pfam01697 | Glyco_transf_92 | 2.0e-43 | 369 | 579 | 233 | + Glycosyltransferase family 92. Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily. | ||
| pfam10354 | DUF2431 | 6.0e-60 | 19 | 185 | 169 | + Domain of unknown function (DUF2431). This is the N-terminal domain of a family of proteins found from plants to humans. The function is not known. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL08261.1 | 0 | 175 | 661 | 84 | 564 | AT5g40720/MNF13_240 [Arabidopsis thaliana] |
| DDBJ | BAA95709.1 | 0 | 170 | 648 | 89 | 550 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189369.1 | 0 | 170 | 656 | 89 | 563 | zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] |
| RefSeq | NP_198888.1 | 0 | 175 | 661 | 84 | 564 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002300081.1 | 0 | 169 | 648 | 85 | 553 | predicted protein [Populus trichocarpa] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| GR454794 | 270 | 335 | 601 | 0 |
| GO865776 | 323 | 328 | 646 | 0 |
| AV823146 | 219 | 369 | 587 | 0 |
| EY662079 | 258 | 377 | 634 | 0 |
| DR808458 | 279 | 369 | 646 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |