| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra028479 |
| Family | GT77 |
| Protein Properties | Length: 270 Molecular Weight: 30553 Isoelectric Point: 8.0777 |
| Chromosome | Chromosome/Scaffold: 02 Start: 592665 End: 593967 |
| Description | Nucleotide-diphospho-sugar transferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT77 | 66 | 259 | 1.8e-36 |
| LNHLIVVALDNQALRYCRRAHPRCYLHTGSGKKIGSVNPDGLIAGWNKKALVKEILELGYNMIFTEADVIWLRNPLMHCHPHNSVSVACGFSSSDQQHVT AENTGGFFYAKSNEITIDMFKILNVERVLYPSTGNQSFCDIVKREDVIRGLNMKVTYLDDDNFVRFCQQNRQNQSKITTVHASCYDDTKSKVQY | |||
| Full Sequence |
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| Protein Sequence Length: 270 Download |
| MSTIRGTEFS HIPPESSGLS SLLKEAATED NTVIITMVDR EWAKPASLLD LFLESFRIGE 60 RTKHLLNHLI VVALDNQALR YCRRAHPRCY LHTGSGKKIG SVNPDGLIAG WNKKALVKEI 120 LELGYNMIFT EADVIWLRNP LMHCHPHNSV SVACGFSSSD QQHVTAENTG GFFYAKSNEI 180 TIDMFKILNV ERVLYPSTGN QSFCDIVKRE DVIRGLNMKV TYLDDDNFVR FCQQNRQNQS 240 KITTVHASCY DDTKSKVQYL KLLLQDRKI* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd09084 | EEP-2 | 0.002 | 185 | 218 | 35 | + Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins. | ||
| pfam03407 | Nucleotid_trans | 2.0e-42 | 64 | 260 | 208 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK28734.1 | 0 | 37 | 268 | 1 | 234 | unknown [Arabidopsis thaliana] |
| DDBJ | BAB11352.1 | 0 | 37 | 268 | 1 | 234 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_198906.2 | 0 | 1 | 268 | 39 | 308 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002273650.1 | 0 | 30 | 266 | 3 | 242 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002509529.1 | 0 | 32 | 268 | 5 | 226 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EG471122 | 205 | 1 | 203 | 0 |
| EG471121 | 205 | 1 | 203 | 0 |
| EG471117 | 205 | 1 | 203 | 0 |
| EG471115 | 205 | 1 | 203 | 0 |
| EG471114 | 205 | 1 | 203 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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