| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra028526 |
| Family | GH17 |
| Protein Properties | Length: 431 Molecular Weight: 45859 Isoelectric Point: 7.23 |
| Chromosome | Chromosome/Scaffold: 02 Start: 875710 End: 877002 |
| Description | beta-1,3-glucanase_putative |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 27 | 346 | 0 |
| IGINYGQVANNLPPPKNVIPLLKSVGATKVKLYDADPQALRAFSGSGFDLTVSLGNEYLAQMKDSDKARDWVKQNVQAYLPGTKIVAIVVGNEVLTSNQS DLSAALFPAMQSIHGALVDCGLNKQIFVTTAHSLAILDVSYPPSATSFRHDLLGTLTPILDFHVKTGSPILINAYPFFAYEGNPKHISLDFVLFQPNQGF TDPGSNFHYDNMLFAQVDAVYHALDAVGISYKKVPIVVSETGWPSNGDPQEVGANCDNARKYNGNLIKMMMSKKMRTPIRPDCDLTIFVFALFNENMKPG PTSERNYGLFNPDGTPVYSL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 431 Download |
| MASSQISFSL VCLALLFFSF PLTVTSIGIN YGQVANNLPP PKNVIPLLKS VGATKVKLYD 60 ADPQALRAFS GSGFDLTVSL GNEYLAQMKD SDKARDWVKQ NVQAYLPGTK IVAIVVGNEV 120 LTSNQSDLSA ALFPAMQSIH GALVDCGLNK QIFVTTAHSL AILDVSYPPS ATSFRHDLLG 180 TLTPILDFHV KTGSPILINA YPFFAYEGNP KHISLDFVLF QPNQGFTDPG SNFHYDNMLF 240 AQVDAVYHAL DAVGISYKKV PIVVSETGWP SNGDPQEVGA NCDNARKYNG NLIKMMMSKK 300 MRTPIRPDCD LTIFVFALFN ENMKPGPTSE RNYGLFNPDG TPVYSLGIKT SSSSSGGGSS 360 SGSKNSTGGG GSSSSGGTTG GSPGAGGGGG IYTPENPSPD YMSISSARVK FSTSHFWFIV 420 SNLLLLSFYI * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-6 | 47 | 339 | 306 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-90 | 27 | 346 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_199025.1 | 0 | 12 | 428 | 14 | 425 | ATBG_PAP; glucan endo-1,3-beta-D-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_974868.1 | 0 | 12 | 416 | 14 | 411 | ATBG_PAP; glucan endo-1,3-beta-D-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002300505.1 | 0 | 20 | 348 | 8 | 333 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002317055.1 | 0 | 24 | 355 | 2 | 330 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518930.1 | 0 | 22 | 408 | 21 | 382 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 27 | 346 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 26 | 346 | 1 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 26 | 346 | 1 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 26 | 346 | 1 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 26 | 346 | 1 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
