| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra028661 |
| Family | GH27 |
| Protein Properties | Length: 395 Molecular Weight: 43917.9 Isoelectric Point: 8.2693 |
| Chromosome | Chromosome/Scaffold: 02 Start: 2651111 End: 2653380 |
| Description | alpha-galactosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 235 | 312 | 2e-26 |
| YARPGSWNDPDMLEVGNGGMTREEYRSHFSIWALAKAPLLIGCDLRSMDKVTFELLSNKDVIAVNQDKLGIQGKKVKK | |||
| GH27 | 28 | 131 | 9.8e-32 |
| MLINNGLALTPQMGWNSWNHFQCNINETLIKQTADAMVSSGLSARGYKYINIDDCWGELKRDAQGNMVAKASTFPSGMKALSDYVHSKGLKLGIYSDAGT FTCS | |||
| GH27 | 132 | 230 | 2.4e-34 |
| QTMPGSLGHEEQDAKTFASWGIDYLKYDNCFNTETSPKERYPKMSKALLNSGRSIFFSLCEWGQEDPATWAGDIGNSWRTTGDIQDNWKSMTTIADQND | |||
| Full Sequence |
|---|
| Protein Sequence Length: 395 Download |
| MVLLGFFLRI ITFTLTLTQL VDGFQSRMLI NNGLALTPQM GWNSWNHFQC NINETLIKQT 60 ADAMVSSGLS ARGYKYINID DCWGELKRDA QGNMVAKAST FPSGMKALSD YVHSKGLKLG 120 IYSDAGTFTC SQTMPGSLGH EEQDAKTFAS WGIDYLKYDN CFNTETSPKE RYPKMSKALL 180 NSGRSIFFSL CEWGQEDPAT WAGDIGNSWR TTGDIQDNWK SMTTIADQND RWASYARPGS 240 WNDPDMLEVG NGGMTREEYR SHFSIWALAK APLLIGCDLR SMDKVTFELL SNKDVIAVNQ 300 DKLGIQGKKV KKDGDLEVWA GPLSKKRVAV ILWNRGSLPA NITAGWEDIG LHSSAIVNAR 360 DLWAHSTHSG VKKQLSALVE PHACKMYTLT RRKA* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02065 | Melibiase | 1.0e-27 | 36 | 276 | 307 | + Melibiase. | ||
| PLN03231 | PLN03231 | 3.0e-28 | 38 | 304 | 352 | + putative alpha-galactosidase; Provisional | ||
| PLN02808 | PLN02808 | 0 | 22 | 392 | 371 | + alpha-galactosidase | ||
| PLN02229 | PLN02229 | 0 | 27 | 390 | 368 | + alpha-galactosidase | ||
| PLN02692 | PLN02692 | 0 | 27 | 389 | 364 | + alpha-galactosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC08337.1 | 0 | 1 | 366 | 1 | 358 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_001031855.1 | 0 | 26 | 394 | 2 | 370 | AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_568193.1 | 0 | 1 | 394 | 1 | 396 | AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Swiss-Prot | Q42656 | 0 | 24 | 390 | 10 | 376 | AGAL_COFAR RecName: Full=Alpha-galactosidase; AltName: Full=Alpha-D-galactoside galactohydrolase; AltName: Full=Melibiase; Flags: Precursor |
| RefSeq | XP_002268711.1 | 0 | 27 | 392 | 44 | 409 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 32 | 390 | 3 | 360 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 31 | 386 | 2 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 30 | 392 | 1 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 30 | 392 | 1 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 4do6_B | 0 | 30 | 389 | 1 | 383 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
| stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |
