| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra028844 |
| Family | AA1 |
| Protein Properties | Length: 561 Molecular Weight: 62048.4 Isoelectric Point: 8.5853 |
| Chromosome | Chromosome/Scaffold: 02 Start: 1775840 End: 1778103 |
| Description | laccase 11 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 26 | 552 | 0 |
| AAVKKYQFDVQMKNVSRLCNAKPIVTVNGMFPGPTVYAREGDRVIINVTNHVKYNLSIHWHGLKQYRNGWADGPAYITQCPMQTGQSYVYDFNVTGQRGT LWWHAHILWLRATVYGAIVILPQPGKPYPFPQPYQETNIVLGEWWNGDVETAVNQANQLGAPPPMSDAHTINGKPGPLFPCSEKHTFVVEVEAGKTYLLR IINAALNDELFFGISGHDMTVVEIDAVYTKPFTTKFILIGPGQTTNVLVKTDSSPNRYFMAAGPFMDAPVSVDNKTATAILQYKGVPNTVIPILPKLPSP NDTSFALDYNGKLRSLNTPNFPALVPLKVDRRLFYTIGLGINACPTCVNGTNLAASINNITFVMPKIALLKAHYFNLPGVFRTDFPDRPPKAFNYTGVPL TANLGTSTGTRLSRVKFNTTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGVGNFDPKTDPAKFNLIDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCH LEVHTMWGLKMAFVVENGNTPELSVLP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 561 Download |
| MKILNPGFLF LFFYLLGFLG DSPVDAAVKK YQFDVQMKNV SRLCNAKPIV TVNGMFPGPT 60 VYAREGDRVI INVTNHVKYN LSIHWHGLKQ YRNGWADGPA YITQCPMQTG QSYVYDFNVT 120 GQRGTLWWHA HILWLRATVY GAIVILPQPG KPYPFPQPYQ ETNIVLGEWW NGDVETAVNQ 180 ANQLGAPPPM SDAHTINGKP GPLFPCSEKH TFVVEVEAGK TYLLRIINAA LNDELFFGIS 240 GHDMTVVEID AVYTKPFTTK FILIGPGQTT NVLVKTDSSP NRYFMAAGPF MDAPVSVDNK 300 TATAILQYKG VPNTVIPILP KLPSPNDTSF ALDYNGKLRS LNTPNFPALV PLKVDRRLFY 360 TIGLGINACP TCVNGTNLAA SINNITFVMP KIALLKAHYF NLPGVFRTDF PDRPPKAFNY 420 TGVPLTANLG TSTGTRLSRV KFNTTIELVL QDTNLLTVES HPFHLHGYNF FVVGTGVGNF 480 DPKTDPAKFN LIDPPERNTV GVPTGGWAAI RFRADNPGVW FMHCHLEVHT MWGLKMAFVV 540 ENGNTPELSV LPPPKDYPSC * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 6.0e-56 | 35 | 542 | 556 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02191 | PLN02191 | 7.0e-77 | 26 | 539 | 552 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 9.0e-87 | 24 | 543 | 562 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-99 | 28 | 543 | 555 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 26 | 560 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB86093.1 | 0 | 7 | 560 | 2 | 555 | laccase precursor-like [Arabidopsis thaliana] |
| EMBL | CBI32739.1 | 0 | 23 | 560 | 25 | 562 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_195946.2 | 0 | 7 | 560 | 4 | 557 | LAC11 (laccase 11); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002275392.1 | 0 | 11 | 560 | 6 | 557 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002519529.1 | 0 | 1 | 560 | 3 | 559 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 26 | 539 | 1 | 522 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1asq_A | 0 | 26 | 539 | 1 | 522 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1asp_B | 0 | 26 | 539 | 1 | 522 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1asp_A | 0 | 26 | 539 | 1 | 522 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1aso_B | 0 | 26 | 539 | 1 | 522 | A Chain A, Arabidopsis Thaliana Peroxidase N |
