| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra028891 |
| Family | AA1 |
| Protein Properties | Length: 560 Molecular Weight: 61229.6 Isoelectric Point: 9.9029 |
| Chromosome | Chromosome/Scaffold: 02 Start: 1561871 End: 1564548 |
| Description | laccase 10 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 24 | 547 | 0 |
| AIRKYTFNVVTKQMTRLCSTKQIVTVNGKFPGPTIYANEDDTILVNVVNNVKYNVSIHWHGIRQLRTGWADGPAYITQCPIKPGHSYMYNFTVTGQRGTL WWHAHVLWLRATVHGAIVILPKPGLPYPFPKPHREEVIVLGEWWKSDTENVINEALKSGLAPNVSDAHVINGHPGLVPNCPSQGNFKLAVESGKTYMLRL VNAAMNEELFFKIAGHRFTIVEVDAVYVKPFTTDTILIAPGQTTTALVSAARPSGKYLIAAAPFQDSAVVAVDNRTATATVHYSGTLSATPTKTTSPPAQ NATSVANSFVNSLRSLNSVTYPAKVPIKIDHDLLFTVGLGINRCHSCKAGNLSRVVAAINNITFKMPKTALLQAHYFNLTGIYTTDFPAKPHHVFDFTGK PPSNLATMKATKLYKLPYNSTVQVVLQDTGNVAPENHPIHLHGFNFFVVGIGSGNYNSKKDSKKFNLVDPVERNTVGVPSGGWAAIRFRADNPGVWFMHC HLEVHTTWGLKMAFLVENGKGPNQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 560 Download |
| MGFPIRILVL FALLAFPAAC VHGAIRKYTF NVVTKQMTRL CSTKQIVTVN GKFPGPTIYA 60 NEDDTILVNV VNNVKYNVSI HWHGIRQLRT GWADGPAYIT QCPIKPGHSY MYNFTVTGQR 120 GTLWWHAHVL WLRATVHGAI VILPKPGLPY PFPKPHREEV IVLGEWWKSD TENVINEALK 180 SGLAPNVSDA HVINGHPGLV PNCPSQGNFK LAVESGKTYM LRLVNAAMNE ELFFKIAGHR 240 FTIVEVDAVY VKPFTTDTIL IAPGQTTTAL VSAARPSGKY LIAAAPFQDS AVVAVDNRTA 300 TATVHYSGTL SATPTKTTSP PAQNATSVAN SFVNSLRSLN SVTYPAKVPI KIDHDLLFTV 360 GLGINRCHSC KAGNLSRVVA AINNITFKMP KTALLQAHYF NLTGIYTTDF PAKPHHVFDF 420 TGKPPSNLAT MKATKLYKLP YNSTVQVVLQ DTGNVAPENH PIHLHGFNFF VVGIGSGNYN 480 SKKDSKKFNL VDPVERNTVG VPSGGWAAIR FRADNPGVWF MHCHLEVHTT WGLKMAFLVE 540 NGKGPNQSIL PPPSDLPKC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 7.0e-44 | 31 | 142 | 114 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 8.0e-69 | 24 | 549 | 565 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-73 | 21 | 537 | 543 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-83 | 25 | 537 | 552 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 23 | 559 | 540 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB69847.1 | 0 | 1 | 559 | 1 | 553 | laccase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_195739.2 | 0 | 1 | 559 | 1 | 558 | LAC10 (laccase 10); laccase [Arabidopsis thaliana] |
| RefSeq | NP_565881.1 | 0 | 5 | 559 | 6 | 558 | IRX12 (IRREGULAR XYLEM 12); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002322961.1 | 0 | 1 | 559 | 1 | 557 | laccase 1a [Populus trichocarpa] |
| RefSeq | XP_002533894.1 | 0 | 5 | 559 | 5 | 556 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 25 | 537 | 3 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asq_A | 0 | 25 | 537 | 3 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asp_B | 0 | 25 | 537 | 3 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asp_A | 0 | 25 | 537 | 3 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1aso_B | 0 | 25 | 537 | 3 | 521 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
